RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ASTN2O75129 1339 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 STK36Q9NRP7 1315 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 A0A0G2JPF8 293 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CLRN2A0PK11 232 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ERICH2A1L162 156 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CTAGE9A4FU28 777 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 LRRC14BA6NHZ5 514 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 BTBD18B2RXH4 712 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 HNRNPCL3B7ZW38 293 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 DDX39AO00148 427 aaKnown RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 NFKBIEO00221 500 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 DYNC1I1O14576 645 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 IKBKBO14920 756 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CETN3O15182 167 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CYTH3O43739 400 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ZEB2O60315 1214 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GDF9O60383 454 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 FOXD2O60548 495 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 SRGAP2O75044 1071 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 SLITRK3O94933 977 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 EPN2O95208 641 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 EGFRP00533 1210 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 DHRS4L1P0CG22 281 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 HNRNPCL4P0DMR1 293 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 PYGMP11217 842 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 PCP11498 1178 aaKnown RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 CKBP12277 381 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ALAS1P13196 640 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 SCG2P13521 617 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 IFNAR1P17181 557 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TAL1P17542 331 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 GAP43P17677 238 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 LAG3P18627 525 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 HLA-DPA1P20036 260 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 POU3F2P20265 443 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 COL9A1P20849 921 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 HMGB2P26583 209 aaKnown RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 MARCKSP29966 332 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 PPM1AP35813 382 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 MSH2P43246 934 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GCGRP47871 477 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ATP5OP48047 213 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GSK3AP49840 483 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 PEX5P50542 639 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TOB1P50616 345 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 USP11P51784 963 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 YARSP54577 528 aaKnown RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 CCNA1P78396 465 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CENPCQ03188 943 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GABPAQ06546 454 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 NR5A1Q13285 461 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GRB10Q13322 594 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 SSPNQ14714 243 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GRM4Q14833 912 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ODF1Q14990 250 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 NPY5RQ15761 445 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CLPPQ16740 277 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 STRIP1Q5VSL9 837 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 HHIPL2Q6UWX4 724 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TMTC3Q6ZXV5 915 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 IKBIPQ70UQ0 350 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 DGLUCYQ7Z3D6 616 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ATCAYQ86WG3 371 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TMTC1Q8IUR5 882 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 NOSTRINQ8IVI9 506 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TRIM42Q8IWZ5 723 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CCDC170Q8IYT3 715 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CRACR2BQ8N4Y2 399 aaPredicted RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 OR2C3Q8N628 320 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ANKRD53Q8N9V6 530 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ANKRD52Q8NB46 1076 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GALNT6Q8NCL4 622 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 DENND6BQ8NEG7 585 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 SUPT20HQ8NEM7 779 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ANKRD20A12PQ8NF67 263 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 FBXO18Q8NFZ0 1043 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GOLGA5Q8TBA6 731 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TRAPPC12Q8WVT3 735 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 GPKOWQ92917 476 aaPredicted RBP eCLIP3.81□□□□□ -1.8
SMG6-208ENST00000570874 HLA-CQ95604 372 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 PDLIM2Q96JY6 352 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 ZDHHC15Q96MV8 337 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CLUHP3Q96NS8 147 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 FERD3LQ96RJ6 166 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TMEM47Q9BQJ4 181 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 MRPL4Q9BYD3 311 aaKnown RBP3.81□□□□□ -1.8
SMG6-208ENST00000570874 ARHGAP39Q9C0H5 1083 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TNMDQ9H2S6 317 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 RABEP2Q9H5N1 569 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 JMJD4Q9H9V9 463 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 MKNK2Q9HBH9 465 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 SPON1Q9HCB6 807 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 CD93Q9NPY3 652 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 VPS45Q9NRW7 570 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TBCCD1Q9NVR7 557 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 TBC1D14Q9P2M4 693 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 MAD2L2Q9UI95 211 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 VPS28Q9UK41 221 aa3.81□□□□□ -1.8
SMG6-208ENST00000570874 DNM3Q9UQ16 869 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms