RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ZNF580	Q9UK33	172 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	PRKAB1	Q9Y478	270 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	PRAMEF33	A0A0G2JMD5	474 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	YY2	O15391	372 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	SGTA	O43765	313 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	PRAMEF10	O60809	474 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	MTHFD1	P11586	935 aa	Known RBP	4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	RPS7	P62081	194 aa	Known RBP	4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	KLF1	Q13351	362 aa	Predicted RBP	4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	PTPRR	Q15256	657 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	ZNF788	Q6ZQV5	615 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	PTF1A	Q7RTS3	328 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	CLNK	Q7Z7G1	428 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	AMOTL1	Q8IY63	956 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	ZGPAT	Q8N5A5	531 aa	Known RBP	4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	OR2I1P	Q8NGU4	316 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	SSH3	Q8TE77	659 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	PHLDB1	Q86UU1	1377 aa		4.62	□□□□□ -1.67
UBR1-209	ENST00000569243	TCRBV7S2A1N4T	A0A589	114 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	CDHR4	A6H8M9	788 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243		E7ENX8	843 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	OSM	P13725	252 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	KCNA2	P16389	499 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	PROK1	P58294	105 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	CDC42EP1	Q00587	391 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	TAP2	Q03519	686 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	GEN1	Q17RS7	908 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	PABPC1L	Q4VXU2	614 aa	Known RBP	4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	TBC1D15	Q8TC07	691 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	PGBD1	Q96JS3	809 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	FCRL4	Q96PJ5	515 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	JKAMP	Q9P055	326 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	DNM3	Q9UQ16	869 aa		4.61	□□□□□ -1.67
UBR1-209	ENST00000569243	ANXA1	P04083	346 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	FCER1A	P12319	257 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	POU6F2	P78424	691 aa	Predicted RBP	4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	ZNF844	Q08AG5	666 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	HLX	Q14774	488 aa	Predicted RBP	4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	SF3B3	Q15393	1217 aa	Known RBP	4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	KAZN	Q674X7	775 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	MIGA2	Q7L4E1	593 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	SARAF	Q96BY9	339 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	WAC	Q9BTA9	647 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	PUS7L	Q9H0K6	701 aa	Known RBP	4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	INTU	Q9ULD6	942 aa		4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	RUVBL1	Q9Y265	456 aa	Known RBP	4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
UBR1-209	ENST00000569243	KIAA0391	O15091	583 aa	Known RBP	4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	SLC43A1	O75387	559 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	CELA2A	P08217	269 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	TKT	P29401	623 aa	Known RBP	4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	GRIA3	P42263	894 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	SLC16A1	P53985	500 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	KRT85	P78386	507 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	DYRK1A	Q13627	763 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	RAB39A	Q14964	217 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	INAVA	Q3KP66	663 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	LHFPL2	Q6ZUX7	228 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	TMPRSS9	Q7Z410	1059 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	RHOT1	Q8IXI2	618 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	IFI44	Q8TCB0	444 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	NRG4	Q8WWG1	115 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	HDAC10	Q969S8	669 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	RGMA	Q96B86	450 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	TDP1	Q9NUW8	608 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	CALCOCO1	Q9P1Z2	691 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	USP35	Q9P2H5	1018 aa		4.59	□□□□□ -1.67
UBR1-209	ENST00000569243	SPATA31A3	Q5VYP0	1347 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	WIPF3	A6NGB9	483 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	GRM6	O15303	877 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	TP73	O15350	636 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	GPD1	P21695	349 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	SLC6A4	P31645	630 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	ANXA11	P50995	505 aa	Known RBP	4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	NXPH1	P58417	271 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	FPGS	Q05932	587 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	PIGF	Q07326	219 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	EZH2	Q15910	746 aa	Known RBP	4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	GIMAP6	Q6P9H5	292 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	NECAB2	Q7Z6G3	386 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	RSPH3	Q86UC2	560 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	DCBLD1	Q8N8Z6	715 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	ASB6	Q9NWX5	421 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	CTTNBP2NL	Q9P2B4	639 aa		4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.58	□□□□□ -1.68
UBR1-209	ENST00000569243	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	AGFG2	O95081	481 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	RPLP2	P05387	115 aa	Known RBP	4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	GATA3	P23771	443 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	CNGA1	P29973	690 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	PTGER1	P34995	402 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	ITIH3	Q06033	890 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	AKNAD1	Q5T1N1	836 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	UTP14C	Q5TAP6	766 aa	Known RBP	4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	PPP4R3A	Q6IN85	833 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	ZNF365	Q70YC5	407 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms