RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TSPAN18Q96SJ8 248 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 CNTNAP3Q9BZ76 1288 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 TRIP11Q15643 1979 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 M0QZQ0 153 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 ARNTLO00327 626 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 MOSPD3O75425 235 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 FGF19O95750 216 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 PAX3P23760 479 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 FCHO2Q0JRZ9 810 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 PTGDRQ13258 359 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 KYAT1Q16773 422 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 DGKKQ5KSL6 1271 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 C18orf25Q96B23 403 aaPredicted RBP17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 ZSWIM3Q96MP5 696 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 SLITRK6Q9H5Y7 841 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 ASB3Q9Y575 518 aa17.18■□□□□ 0.34
HERPUD1-215ENST00000568676 OR6C75A6NL08 312 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 HEPACAM2A8MVW5 462 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 H0YCG3 227 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 SLC30A4O14863 429 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 CLDN3O15551 220 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 XPOTO43592 962 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 CYP3A5P20815 502 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 SCP2P22307 547 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 CCNE1P24864 410 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 LRPAP1P30533 357 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 PRPHP41219 470 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 VIPR2P41587 438 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 EPHB3P54753 998 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 SIM2Q14190 667 aaPredicted RBP17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 SLC10A6Q3KNW5 377 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 RINT1Q6NUQ1 792 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 RNF19BQ6ZMZ0 732 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 C1orf186Q6ZWK4 172 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 USP37Q86T82 979 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 HS6ST3Q8IZP7 471 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 DDX1Q92499 740 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 PARD6AQ9NPB6 346 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 OBP2AQ9NY56 170 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 KCND2Q9NZV8 630 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 HSFX1Q9UBD0 423 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 YIPF1Q9Y548 306 aa17.17■□□□□ 0.34
HERPUD1-215ENST00000568676 CITO14578 2027 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 F5P12259 2224 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 E9PMD0 336 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 ADRB1P08588 477 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 CLTAP09496 248 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 HOXA6P31267 233 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 ALDH1A3P47895 512 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 AARSP49588 968 aaKnown RBP eCLIP17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 MCL1Q07820 350 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 SPEM2Q0P670 501 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 ST3GAL1Q11201 340 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 MAPK7Q13164 816 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 GPR17Q13304 367 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 TEAD2Q15562 447 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 CSRP2Q16527 193 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 PRR23BQ6ZRT6 265 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 LONP2Q86WA8 852 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 RALGPS2Q86X27 583 aaPredicted RBP17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 SYNPOQ8N3V7 929 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 SHKBP1Q8TBC3 707 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 ANKFY1Q9P2R3 1169 aa17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 UBQLN1Q9UMX0 589 aaKnown RBP17.16■□□□□ 0.34
HERPUD1-215ENST00000568676 MYBPHLA2RUH7 354 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 DCDC2BA2VCK2 349 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 SLC16A4O15374 487 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 HARSP12081 509 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 PLS3P13797 630 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.341e-7■■□□□ 11.7
HERPUD1-215ENST00000568676 WEE1P30291 646 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 KPNA1P52294 538 aaPredicted RBP17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 SATB1Q01826 763 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 MYBPC2Q14324 1141 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 ARHGAP29Q52LW3 1261 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 FAM184AQ8NB25 1140 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 TMEM161BQ8NDZ6 487 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 KCNN1Q92952 543 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 LRRC3Q9BY71 257 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 SEMA4GQ9NTN9 838 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 ZMYM5Q9UJ78 669 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 TICRRQ7Z2Z1 1910 aa17.15■□□□□ 0.34
HERPUD1-215ENST00000568676 A0A1W2PRU2 124 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 TTC26A0AVF1 554 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 NRG2O14511 850 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 DPYSL4O14531 572 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 MEFVO15553 781 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 MAPTP10636 758 aaKnown RBP17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 GJA1P17302 382 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 TYMPP19971 482 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
HERPUD1-215ENST00000568676 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms