RNA–Protein interactions for RNA: ENST00000568162.5

SNUPN-210, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-210ENST00000568162 NUP85Q9BW27 656 aa17.25■□□□□ 0.35
SNUPN-210ENST00000568162 ARHGAP39Q9C0H5 1083 aa17.25■□□□□ 0.35
SNUPN-210ENST00000568162 CARD9Q9H257 536 aa17.25■□□□□ 0.35
SNUPN-210ENST00000568162 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
SNUPN-210ENST00000568162 CISHQ9NSE2 258 aa17.25■□□□□ 0.35
SNUPN-210ENST00000568162 CNOT8Q9UFF9 292 aaKnown RBP17.25■□□□□ 0.35
SNUPN-210ENST00000568162 PGRMC1O00264 195 aaKnown RBP17.24■□□□□ 0.35
SNUPN-210ENST00000568162 DDX3YO15523 660 aaKnown RBP17.24■□□□□ 0.35
SNUPN-210ENST00000568162 TREHO43280 583 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 TOMM70O94826 608 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 PAEPP09466 180 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 RHOXF2BP0C7M4 288 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 RARBP10826 455 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
SNUPN-210ENST00000568162 PRKCZQ05513 592 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
SNUPN-210ENST00000568162 LIN9Q5TKA1 542 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 NAA35Q5VZE5 725 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
SNUPN-210ENST00000568162 PNKPQ96T60 521 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 RHOXF2Q9BQY4 288 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 ZNF518BQ9C0D4 1074 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 EPC1Q9H2F5 836 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 GOLPH3Q9H4A6 298 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 PCDHGC3Q9UN70 934 aa17.24■□□□□ 0.35
SNUPN-210ENST00000568162 MYADML2A6NDP7 307 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 ZRANB2O95218 330 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNUPN-210ENST00000568162 ITGB3P05106 788 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 KRT19P08727 400 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 FGFR4P22455 802 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 CTNNA2P26232 953 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 CST5P28325 142 aaPredicted RBP17.23■□□□□ 0.35
SNUPN-210ENST00000568162 CDH5P33151 784 aaPredicted RBP17.23■□□□□ 0.35
SNUPN-210ENST00000568162 YARSP54577 528 aaKnown RBP17.23■□□□□ 0.35
SNUPN-210ENST00000568162 TNNC1P63316 161 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 RBP5P82980 135 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 UBL4BQ8N7F7 174 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 USP38Q8NB14 1042 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 CAPNS2Q96L46 248 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNUPN-210ENST00000568162 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 ARFGAP3Q9NP61 516 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 TMEM59LQ9UK28 342 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 SCINQ9Y6U3 715 aa17.23■□□□□ 0.35
SNUPN-210ENST00000568162 CCDC188H7C350 402 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 M0QZ92 97 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 ATMINO43313 823 aaPredicted RBP17.22■□□□□ 0.35
SNUPN-210ENST00000568162 MED7O43513 233 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 CEP104O60308 925 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 POLR2BP30876 1174 aaKnown RBP17.22■□□□□ 0.35
SNUPN-210ENST00000568162 DNA2P51530 1060 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 VSNL1P62760 191 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 SP3Q02447 781 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 TMEM62Q0P6H9 643 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 MAP9Q49MG5 647 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 SCARA3Q6AZY7 606 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 SCARA5Q6ZMJ2 495 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 ZNF606Q8WXB4 792 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 CYFIP2Q96F07 1278 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 KIF12Q96FN5 646 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 MS4A14Q96JA4 679 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 NAP1L3Q99457 506 aaPredicted RBP17.22■□□□□ 0.35
SNUPN-210ENST00000568162 CDHR5Q9HBB8 845 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 DPP3Q9NY33 737 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 CNTN3Q9P232 1028 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 POLIQ9UNA4 740 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
SNUPN-210ENST00000568162 CEP83Q9Y592 693 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 TRPV2Q9Y5S1 764 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 ALG6Q9Y672 507 aa17.22■□□□□ 0.35
SNUPN-210ENST00000568162 TRIP12Q14669 1992 aaPredicted RBP17.22■□□□□ 0.35
SNUPN-210ENST00000568162 CALCAP01258 141 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 CD58P19256 250 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 TNFRSF8P28908 595 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 MRPS6P82932 125 aaKnown RBP17.21■□□□□ 0.35
SNUPN-210ENST00000568162 GNASQ5JWF2 1037 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 C8orf74Q6P047 294 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 RSPH3Q86UC2 560 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 TMEM35BQ8NCS4 154 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 BEST2Q8NFU1 509 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 ZSWIM1Q9BR11 485 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 TRIM6Q9C030 488 aaPredicted RBP17.21■□□□□ 0.35
SNUPN-210ENST00000568162 MRPL47Q9HD33 250 aaKnown RBP17.21■□□□□ 0.35
SNUPN-210ENST00000568162 CREBZFQ9NS37 354 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 RBM12Q9NTZ6 932 aaKnown RBP17.21■□□□□ 0.35
SNUPN-210ENST00000568162 ZNF446Q9NWS9 450 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
SNUPN-210ENST00000568162 CCDC66A2RUB6 948 aa17.2■□□□□ 0.34
SNUPN-210ENST00000568162 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
SNUPN-210ENST00000568162 CALB1P05937 261 aa17.2■□□□□ 0.34
SNUPN-210ENST00000568162 HSPA6P17066 643 aa17.2■□□□□ 0.34
SNUPN-210ENST00000568162 COMTP21964 271 aa17.2■□□□□ 0.34
SNUPN-210ENST00000568162 HOXD10P28358 340 aa17.2■□□□□ 0.34
SNUPN-210ENST00000568162 CTNNA1P35221 906 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms