RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 UROC1Q96N76 676 aa15.19■□□□□ 0.02
SMG1-213ENST00000567737 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
SMG1-213ENST00000567737 SMG1Q96Q15 3661 aaKnown RBP15.19■□□□□ 0.02
SMG1-213ENST00000567737 CYP3A7-CYP3A51PA0A087WV96 503 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 KLF18A0A0U1RQI7 1052 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 TBX3O15119 743 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 MEFVO15553 781 aaPredicted RBP15.18■□□□□ 0.02
SMG1-213ENST00000567737 RNF40O75150 1001 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 APBB3O95704 486 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 CYP3A7P24462 503 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 ADD1P35611 737 aaKnown RBP15.18■□□□□ 0.02
SMG1-213ENST00000567737 AKAP17AQ02040 695 aaKnown RBP15.18■□□□□ 0.02
SMG1-213ENST00000567737 TNK2Q07912 1038 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 PPP2R5CQ13362 524 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 TMEM132AQ24JP5 1023 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 TMEM196Q5HYL7 178 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 LRIG1Q96JA1 1093 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 LXNQ9BS40 222 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 CXCL16Q9H2A7 254 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 CCDC86Q9H6F5 360 aaKnown RBP15.18■□□□□ 0.02
SMG1-213ENST00000567737 CACNA2D2Q9NY47 1150 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 OBP2AQ9NY56 170 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 EBF1Q9UH73 591 aa15.18■□□□□ 0.02
SMG1-213ENST00000567737 EML5Q05BV3 1969 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 CCDC194A0A1B0GVG4 234 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 N4BP3O15049 544 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 PRPF3O43395 683 aaKnown RBP15.17■□□□□ 0.02
SMG1-213ENST00000567737 MAPK8P45983 427 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 RCAN1P53805 252 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 UPP1Q16831 310 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 ZNF423Q2M1K9 1284 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 USP39Q53GS9 565 aaKnown RBP15.17■□□□□ 0.02
SMG1-213ENST00000567737 GLRA4Q5JXX5 417 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 FSTL4Q6MZW2 842 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 CD300LGQ6UXG3 332 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 BPIFB1Q8TDL5 484 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 PRIMPOLQ96LW4 560 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 TCEANC2Q96MN5 208 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 ADPGKQ9BRR6 497 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 NUSAP1Q9BXS6 441 aaKnown RBP15.17■□□□□ 0.02
SMG1-213ENST00000567737 PRMT7Q9NVM4 692 aaPredicted RBP15.17■□□□□ 0.02
SMG1-213ENST00000567737 POLR3BQ9NW08 1133 aaPredicted RBP15.17■□□□□ 0.02
SMG1-213ENST00000567737 AFF4Q9UHB7 1163 aaKnown RBP15.17■□□□□ 0.02
SMG1-213ENST00000567737 EVLQ9UI08 416 aaPredicted RBP15.17■□□□□ 0.02
SMG1-213ENST00000567737 FBXL5Q9UKA1 691 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 MAFFQ9ULX9 164 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 IGSF10Q6WRI0 2623 aa15.17■□□□□ 0.02
SMG1-213ENST00000567737 SYN3O14994 580 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 GLRA2P23416 452 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 DHPSP49366 369 aaPredicted RBP15.16■□□□□ 0.02
SMG1-213ENST00000567737 DGKEP52429 567 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 CTXN3Q4LDR2 81 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 TRIM61Q5EBN2 209 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 STXBP5Q5T5C0 1151 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 NOSTRINQ8IVI9 506 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 C3orf58Q8NDZ4 430 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 PIGKQ92643 395 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 LRRC3BQ96PB8 259 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 PDZD7Q9H5P4 517 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 THG1LQ9NWX6 298 aaKnown RBP15.16■□□□□ 0.02
SMG1-213ENST00000567737 VPS54Q9P1Q0 977 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 DDX25Q9UHL0 483 aaKnown RBP15.16■□□□□ 0.02
SMG1-213ENST00000567737 VAV3Q9UKW4 847 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 INVSQ9Y283 1065 aa15.16■□□□□ 0.02
SMG1-213ENST00000567737 HELZ2Q9BYK8 2649 aaKnown RBP15.15■□□□□ 0.02
SMG1-213ENST00000567737 LRRIQ4A6NIV6 560 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 TRDMT1O14717 391 aaKnown RBP15.15■□□□□ 0.02
SMG1-213ENST00000567737 DGAT1O75907 488 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 IGHDP01880 384 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 ARL2P36404 184 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 NLRP5P59047 1200 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 PLD1Q13393 1074 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 EPHA7Q15375 998 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 PPP4R3AQ6IN85 833 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 SYT13Q7L8C5 426 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 RAB44Q7Z6P3 723 aaPredicted RBP15.15■□□□□ 0.02
SMG1-213ENST00000567737 PPP1R10Q96QC0 940 aaKnown RBP15.15■□□□□ 0.02
SMG1-213ENST00000567737 GOLGA2P5Q9HBQ8 144 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 YIPF1Q9Y548 306 aa15.15■□□□□ 0.02
SMG1-213ENST00000567737 UPK3BL1B0FP48 263 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 UPK3BL2E5RIL1 263 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 ZBTB39O15060 712 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 EGFP01133 1207 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 CPB1P15086 417 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 DRD1P21728 446 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 MCM2P49736 904 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 AMPD2Q01433 879 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 EXOSC10Q01780 885 aaKnown RBP15.14■□□□□ 0.01
SMG1-213ENST00000567737 SEMA3BQ13214 749 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 CTTNQ14247 550 aaKnown RBP15.14■□□□□ 0.01
SMG1-213ENST00000567737 DMC1Q14565 340 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 FBXO43Q4G163 708 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 ARHGAP15Q53QZ3 475 aa15.14■□□□□ 0.01
SMG1-213ENST00000567737 ZNF280DQ6N043 979 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms