RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 NTPCRQ9BSD7 190 aaKnown RBP10.04□□□□□ -0.8
CDH13-210ENST00000567445 RPP25Q9BUL9 199 aaKnown RBP10.04□□□□□ -0.8
CDH13-210ENST00000567445 CNTN3Q9P232 1028 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 KCNG1Q9UIX4 513 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 KCNH3Q9ULD8 1083 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 CITO14578 2027 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 NOTCH4Q99466 2003 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
CDH13-210ENST00000567445 TOM1L1O75674 476 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 PLS3P13797 630 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 RPL9P32969 192 aaKnown RBP10.04□□□□□ -0.8
CDH13-210ENST00000567445 ABL2P42684 1182 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 SMTNP53814 917 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 GPC5P78333 572 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 STRN3Q13033 797 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 NOLC1Q14978 699 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDH13-210ENST00000567445 PABPC1LQ4VXU2 614 aaKnown RBP10.04□□□□□ -0.8
CDH13-210ENST00000567445 SLC8B1Q6J4K2 584 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 TMEM161BQ8NDZ6 487 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 SPIRE2Q8WWL2 714 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 SHDQ96IW2 340 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 HCFC1R1Q9NWW0 138 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 KCND2Q9NZV8 630 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 DNMT3BQ9UBC3 853 aaKnown RBP10.04□□□□□ -0.8
CDH13-210ENST00000567445 SIT1Q9Y3P8 196 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
CDH13-210ENST00000567445 SPTBN4Q9H254 2564 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 MYH15Q9Y2K3 1946 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 MYH11P35749 1972 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 ARHGEF37A1IGU5 675 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 VWA3AA6NCI4 1184 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 H7C4K7 107 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 SYN3O14994 580 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 MEFVO15553 781 aaPredicted RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 ABLIM3O94929 683 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 MAPTP10636 758 aaKnown RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 HARSP12081 509 aaKnown RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 MMP16P51512 607 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 STARD6P59095 220 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 ROR1Q01973 937 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 RAD51AP2Q09MP3 1159 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 SPECC1Q5M775 1068 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 ARL6IP4Q66PJ3 421 aaKnown RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 NPAS3Q8IXF0 933 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 SYT2Q8N9I0 419 aaPredicted RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 ZBTB45Q96K62 511 aaPredicted RBP10.03□□□□□ -0.8
CDH13-210ENST00000567445 PNMA5Q96PV4 448 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 GDE1Q9NZC3 331 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 DLGAP2Q9P1A6 1054 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 ANKFY1Q9P2R3 1169 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 NUB1Q9Y5A7 615 aa10.03□□□□□ -0.8
CDH13-210ENST00000567445 WDR27A2RRH5 827 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 H3BQV1 296 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 PRRG1O14668 218 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 TBC1D4O60343 1298 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 LRG1P02750 347 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 DCNP07585 359 aaKnown RBP10.02□□□□□ -0.81
CDH13-210ENST00000567445 RHOP08100 348 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 PLA2G4BP0C869 781 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 ATF2P15336 505 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 GJB2P29033 226 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 ELF1P32519 619 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 SLC12A3P55017 1021 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 PFKPQ01813 784 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 FOXC1Q12948 553 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 MRPL58Q14197 206 aaKnown RBP10.02□□□□□ -0.81
CDH13-210ENST00000567445 SLC10A6Q3KNW5 377 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 ZPBP2Q6X784 338 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 TCEAL8Q8IYN2 117 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 PJA1Q8NG27 643 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 ING5Q8WYH8 240 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 CDK5RAP3Q96JB5 506 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 TMX3Q96JJ7 454 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 SUSD3Q96L08 255 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 PLIN2Q99541 437 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 KXD1Q9BQD3 176 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 AVENQ9NQS1 362 aaPredicted RBP10.02□□□□□ -0.81
CDH13-210ENST00000567445 FBXL5Q9UKA1 691 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 MRPS23Q9Y3D9 190 aaKnown RBP10.02□□□□□ -0.81
CDH13-210ENST00000567445 EP300Q09472 2414 aaPredicted RBP10.02□□□□□ -0.81
CDH13-210ENST00000567445 CACNA1IQ9P0X4 2223 aa10.02□□□□□ -0.81
CDH13-210ENST00000567445 WDR87Q6ZQQ6 2873 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 KANSL1LA0AUZ9 987 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 H0YCG3 227 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 CLDN3O15551 220 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 SLC26A4O43511 780 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 ECI2O75521 394 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 PTPN2P17706 415 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 MCM4P33991 863 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 ARPP19P56211 112 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 PRKCQQ04759 706 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 MCL1Q07820 350 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 SNW1Q13573 536 aaKnown RBP10.01□□□□□ -0.81
CDH13-210ENST00000567445 MLF2Q15773 248 aaPredicted RBP10.01□□□□□ -0.81
CDH13-210ENST00000567445 SLC5A9Q2M3M2 681 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 CTXN3Q4LDR2 81 aa10.01□□□□□ -0.81
CDH13-210ENST00000567445 TMEM119Q4V9L6 283 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms