RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 MTRRQ9UBK8 725 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 DUSP12Q9UNI6 340 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 CDY1Q9Y6F8 540 aa11.3□□□□□ -0.6
LINC00564-201ENST00000567258 I3L4J1 428 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 SYN3O14994 580 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 CCL16O15467 120 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 TRAK2O60296 914 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 LRG1P02750 347 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 PLCG1P19174 1290 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 BRCC3P46736 316 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 ARPP19P56211 112 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 MCL1Q07820 350 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 CUL4AQ13619 759 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 MCM6Q14566 821 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
LINC00564-201ENST00000567258 XKR4Q5GH76 650 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 SMYD5Q6GMV2 418 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
LINC00564-201ENST00000567258 ELMOD1Q8N336 334 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
LINC00564-201ENST00000567258 RPF1Q9H9Y2 349 aaKnown RBP11.29□□□□□ -0.6
LINC00564-201ENST00000567258 EPS15L1Q9UBC2 864 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
LINC00564-201ENST00000567258 PDGFBP01127 241 aaPredicted RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 CXCL8P10145 99 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 LAMP2P13473 410 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 DDIT3P35638 169 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 MRE11P49959 708 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 CLCN5P51795 746 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 CEBPZQ03701 1054 aaKnown RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 SEZ6Q53EL9 994 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 ZNF280DQ6N043 979 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 MTSS1LQ765P7 747 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 USP37Q86T82 979 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 SIX5Q8N196 739 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 PRSS33Q8NF86 280 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 ZNF461Q8TAF7 563 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 FEZF2Q8TBJ5 459 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 ATOH1Q92858 354 aaPredicted RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 INTS4Q96HW7 963 aaKnown RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 MYADMQ96S97 322 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 TSPAN18Q96SJ8 248 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 RTP3Q9BQQ7 232 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 MSTO1Q9BUK6 570 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 CCSER1Q9C0I3 900 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 SMOC2Q9H3U7 446 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 TBX20Q9UMR3 447 aa11.28□□□□□ -0.6
LINC00564-201ENST00000567258 UBQLN1Q9UMX0 589 aaKnown RBP11.28□□□□□ -0.6
LINC00564-201ENST00000567258 ARHGEF37A1IGU5 675 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
LINC00564-201ENST00000567258 OGTO15294 1046 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 ADAM12O43184 909 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 N4BP1O75113 896 aaKnown RBP11.27□□□□□ -0.61
LINC00564-201ENST00000567258 PAPLNO95428 1278 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 SRFP11831 508 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 CPB1P15086 417 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 PTPN2P17706 415 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 SYT1P21579 422 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 SLC10A6Q3KNW5 377 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 PABPC1LQ4VXU2 614 aaKnown RBP11.27□□□□□ -0.61
LINC00564-201ENST00000567258 RRAGBQ5VZM2 374 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 SLFN12LQ6IEE8 588 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 SV2BQ7L1I2 683 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 CD302Q8IX05 232 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 C3orf58Q8NDZ4 430 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 SUSD3Q96L08 255 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 ZMAT2Q96NC0 199 aaKnown RBP11.27□□□□□ -0.61
LINC00564-201ENST00000567258 WNT16Q9UBV4 365 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 CDH7Q9ULB5 785 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 CLIC4Q9Y696 253 aa11.27□□□□□ -0.61
LINC00564-201ENST00000567258 K7ELQ4 463 aaPredicted RBP11.26□□□□□ -0.61
LINC00564-201ENST00000567258 ABLIM1O14639 778 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 POU2F2P09086 479 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 ATF2P15336 505 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 ZNF131P52739 623 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 ROR1Q01973 937 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 YWHAHQ04917 246 aaPredicted RBP11.26□□□□□ -0.61
LINC00564-201ENST00000567258 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 TPGS2Q68CL5 300 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 IQCEQ6IPM2 695 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 SLC8B1Q6J4K2 584 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 DYMQ7RTS9 669 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
LINC00564-201ENST00000567258 OXCT2Q9BYC2 517 aaPredicted RBP11.26□□□□□ -0.61
LINC00564-201ENST00000567258 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
LINC00564-201ENST00000567258 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms