RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 AMHR2Q16671 573 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 TDRD10Q5VZ19 366 aaKnown RBP18.01■□□□□ 0.47
RAB40C-210ENST00000566290 SESTD1Q86VW0 696 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 PPM1KQ8N3J5 372 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 LRRC57Q8N9N7 239 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 TAF4BQ92750 862 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 SCLYQ96I15 445 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 PDE11AQ9HCR9 933 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 TOPORSQ9NS56 1045 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-210ENST00000566290 ANKFY1Q9P2R3 1169 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 RALGAPA2Q2PPJ7 1873 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 TLL1O43897 1013 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 VNN1O95497 513 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 TNNI1P19237 187 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 HOXC8P31273 242 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 CLCN3P51790 818 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 CDR2Q01850 454 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 PTPN11Q06124 597 aaPredicted RBP18■□□□□ 0.47
RAB40C-210ENST00000566290 PTGISQ16647 500 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 ARHGAP44Q17R89 818 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 ERCC6LQ2NKX8 1250 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 MEI1Q5TIA1 1274 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 NT5DC4Q86YG4 428 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 GLYCTKQ8IVS8 523 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 LRRN4CLQ8ND94 238 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 CTNNBL1Q8WYA6 563 aaPredicted RBP18■□□□□ 0.47
RAB40C-210ENST00000566290 WNT8BQ93098 351 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 ZBTB45Q96K62 511 aaPredicted RBP18■□□□□ 0.47
RAB40C-210ENST00000566290 TLR10Q9BXR5 811 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 ARGLU1Q9NWB6 273 aaPredicted RBP18■□□□□ 0.47
RAB40C-210ENST00000566290 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 ANK1P16157 1881 aa18■□□□□ 0.47
RAB40C-210ENST00000566290 SMIM35A0A1B0GVV1 85 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 GRID2IPA4D2P6 1211 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 RTN2O75298 545 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 ASS1P00966 412 aaKnown RBP17.99■□□□□ 0.47
RAB40C-210ENST00000566290 SRGAP2CP0DJJ0 459 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 MYOGP15173 224 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 PIK3CAP42336 1068 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 ACOT2P49753 483 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 PDE6CP51160 858 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 RABGGTBP53611 331 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 GALCP54803 685 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 MARCH8Q5T0T0 291 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 APBB1IPQ7Z5R6 666 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-210ENST00000566290 TMEM199Q8N511 208 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 UBR7Q8N806 425 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 C7orf31Q8N865 590 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 TRAPPC12Q8WVT3 735 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 HERVK_113Q902F9 699 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 POP1Q99575 1024 aaKnown RBP17.99■□□□□ 0.47
RAB40C-210ENST00000566290 KATNAL1Q9BW62 490 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 PACSIN1Q9BY11 444 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 IMPG2Q9BZV3 1241 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 CDT1Q9H211 546 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 ASB7Q9H672 318 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 PCDHB2Q9Y5E7 798 aa17.99■□□□□ 0.47
RAB40C-210ENST00000566290 PTPRJQ12913 1337 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 INO80B-WBP1J3KQ70 363 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 RFXAPO00287 272 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 LRRN2O75325 713 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 CLTAP09496 248 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 PNMA6AP0CW24 399 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-210ENST00000566290 CYP11B1P15538 503 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 ADAM17P78536 824 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 ZNF568Q3ZCX4 644 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 PSRC1Q6PGN9 363 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-210ENST00000566290 TRIM72Q6ZMU5 477 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 CD302Q8IX05 232 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 METTL13Q8N6R0 699 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 TPCN2Q8NHX9 752 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 DDX1Q92499 740 aaKnown RBP17.98■□□□□ 0.47
RAB40C-210ENST00000566290 NLRP4Q96MN2 994 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 OSBPL9Q96SU4 736 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 INO80BQ9C086 356 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-210ENST00000566290 RAB21Q9UL25 225 aa17.98■□□□□ 0.47
RAB40C-210ENST00000566290 TARSL2A2RTX5 802 aaKnown RBP17.97■□□□□ 0.47
RAB40C-210ENST00000566290 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 ENC1O14682 589 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 PALMO75781 387 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 RPLP2P05387 115 aaKnown RBP17.97■□□□□ 0.47
RAB40C-210ENST00000566290 CHRNB2P17787 502 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 ACO1P21399 889 aaKnown RBP17.97■□□□□ 0.47
RAB40C-210ENST00000566290 MATR3P43243 847 aaKnown RBP eCLIP17.97■□□□□ 0.47
RAB40C-210ENST00000566290 WNT7BP56706 349 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 CUL2Q13617 745 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 DUOXA2Q1HG44 320 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 C11orf63Q6NUN7 778 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 NOP9Q86U38 636 aaKnown RBP17.97■□□□□ 0.47
RAB40C-210ENST00000566290 CREG2Q8IUH2 290 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 KIAA0319LQ8IZA0 1049 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 TSC1Q92574 1164 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 KAT5Q92993 513 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 TRIM11Q96F44 468 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 TCHPQ9BT92 498 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 VRTNQ9H8Y1 702 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 ABCB6Q9NP58 842 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 GTF3C4Q9UKN8 822 aa17.97■□□□□ 0.47
RAB40C-210ENST00000566290 SCN5AQ14524 2016 aa17.96■□□□□ 0.47
RAB40C-210ENST00000566290 CCDC151A5D8V7 595 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms