RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 C3orf36Q3SXR2 165 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 RRP12Q5JTH9 1297 aaKnown RBP4.53□□□□□ -1.68
PALB2-204ENST00000566069 PPP4R3AQ6IN85 833 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 ARMC6Q6NXE6 501 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 MAPKAPK5Q8IW41 473 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 OR56A1Q8NGH5 318 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 JPH3Q8WXH2 748 aaPredicted RBP4.53□□□□□ -1.68
PALB2-204ENST00000566069 DPF2Q92785 391 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 SENP6Q9GZR1 1112 aaPredicted RBP4.53□□□□□ -1.68
PALB2-204ENST00000566069 TMEM140Q9NV12 185 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 KLHL11Q9NVR0 708 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 CACNA1IQ9P0X4 2223 aa4.53□□□□□ -1.68
PALB2-204ENST00000566069 TEX33O43247 280 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 GPR32O75388 356 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 SCGB1D2O95969 90 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 HMGB1P09429 215 aaKnown RBP4.52□□□□□ -1.69
PALB2-204ENST00000566069 IL2RBP14784 551 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 ALOX15P16050 662 aaPredicted RBP4.52□□□□□ -1.69
PALB2-204ENST00000566069 CYP2C19P33261 490 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 PTPN7P35236 360 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 CDC42EP1Q00587 391 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 SRSF4Q08170 494 aaKnown RBP4.52□□□□□ -1.69
PALB2-204ENST00000566069 PPP2R5AQ15172 486 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 FAM47AQ5JRC9 791 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 ZNF425Q6IV72 752 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 CXorf57Q6NSI4 855 aaKnown RBP4.52□□□□□ -1.69
PALB2-204ENST00000566069 RHOT2Q8IXI1 618 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 RHOT1Q8IXI2 618 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 REPS2Q8NFH8 660 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 NACC2Q96BF6 587 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 AIFM3Q96NN9 605 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 ALOXE3Q9BYJ1 711 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 TMEM74BQ9NUR3 256 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 MOCS1Q9NZB8 636 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.52□□□□□ -1.69
PALB2-204ENST00000566069 ATP11BQ9Y2G3 1177 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 CFAP20Q9Y6A4 193 aaKnown RBP4.52□□□□□ -1.69
PALB2-204ENST00000566069 ATRNL1Q5VV63 1379 aa4.52□□□□□ -1.69
PALB2-204ENST00000566069 PJA2O43164 708 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 TSPAN6O43657 245 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 RPLP2P05387 115 aaKnown RBP4.51□□□□□ -1.69
PALB2-204ENST00000566069 POU2F2P09086 479 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 U2AF1L5P0DN76 240 aaPredicted RBP4.51□□□□□ -1.69
PALB2-204ENST00000566069 PDCP20941 246 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
PALB2-204ENST00000566069 U2AF1Q01081 240 aaKnown RBP eCLIP4.51□□□□□ -1.69
PALB2-204ENST00000566069 OCA2Q04671 838 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 FAM102BQ5T8I3 360 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 TSHZ3Q63HK5 1081 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 ZNF788Q6ZQV5 615 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 USP45Q70EL2 814 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 CHPFQ8IZ52 775 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 ZFP28Q8NHY6 868 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 CCHCR1Q8TD31 782 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 PHACTR3Q96KR7 559 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 TDP1Q9NUW8 608 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 ARPP21Q9UBL0 812 aaPredicted RBP4.51□□□□□ -1.69
PALB2-204ENST00000566069 AJAP1Q9UKB5 411 aaPredicted RBP4.51□□□□□ -1.69
PALB2-204ENST00000566069 PCDHA13Q9Y5I0 950 aa4.51□□□□□ -1.69
PALB2-204ENST00000566069 OFD1O75665 1012 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 AMY1AP04745 511 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 SNRPA1P09661 255 aaKnown RBP4.5□□□□□ -1.69
PALB2-204ENST00000566069 ATP8B2P98198 1209 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 TARDBPQ13148 414 aaKnown RBP eCLIP4.5□□□□□ -1.69
PALB2-204ENST00000566069 MTM1Q13496 603 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 IL10RAQ13651 578 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 LRRC41Q15345 812 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 AFMIDQ63HM1 303 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 NXNQ6DKJ4 435 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 PRR18Q8N4B5 295 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 ZGPATQ8N5A5 531 aaKnown RBP4.5□□□□□ -1.69
PALB2-204ENST00000566069 FBXO18Q8NFZ0 1043 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 NSUN6Q8TEA1 469 aaKnown RBP4.5□□□□□ -1.69
PALB2-204ENST00000566069 KAT5Q92993 513 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 BOD1Q96IK1 185 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 ZSWIM1Q9BR11 485 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 GTPBP4Q9BZE4 634 aaKnown RBP4.5□□□□□ -1.69
PALB2-204ENST00000566069 LDAHQ9H6V9 325 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 NMRK2Q9NPI5 230 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 KMT5AQ9NQR1 393 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 IL17RBQ9NRM6 502 aa4.5□□□□□ -1.69
PALB2-204ENST00000566069 MYBBP1AQ9BQG0 1328 aaKnown RBP4.49□□□□□ -1.69
PALB2-204ENST00000566069 WDR91A4D1P6 747 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 CXorf49A8MYA2 514 aaPredicted RBP4.49□□□□□ -1.69
PALB2-204ENST00000566069 RAP2AP10114 183 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 HSPA6P17066 643 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 DDCP20711 480 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 FPR1P21462 350 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 LPOP22079 712 aaPredicted RBP4.49□□□□□ -1.69
PALB2-204ENST00000566069 PCSK1P29120 753 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 ALDH1A3P47895 512 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 CLRN1P58418 232 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 CTXN1P60606 82 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 GTF2H3Q13889 308 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 RAB39AQ14964 217 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 ATP2B3Q16720 1220 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 ATXN7L2Q5T6C5 722 aaPredicted RBP4.49□□□□□ -1.69
PALB2-204ENST00000566069 IFIT1BQ5T764 474 aaKnown RBP4.49□□□□□ -1.69
PALB2-204ENST00000566069 OTUD7BQ6GQQ9 843 aa4.49□□□□□ -1.69
PALB2-204ENST00000566069 SEM1Q6ZVN7 128 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms