RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PPP1R21Q6ZMI0 780 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 NMD3Q96D46 503 aaKnown RBP17.25■□□□□ 0.35
LINC00554-201ENST00000564841 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 SMCHD1A6NHR9 2005 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 GYG2O15488 501 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 COQ9O75208 318 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 NOVP48745 357 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 MAPK6Q16659 721 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 IZUMO2Q6UXV1 221 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 SHKBP1Q8TBC3 707 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 JDP2Q8WYK2 163 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 CLPTM1LQ96KA5 538 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 ZNF184Q99676 751 aaPredicted RBP17.24■□□□□ 0.35
LINC00554-201ENST00000564841 PIM2Q9P1W9 311 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 MAP3K7O43318 606 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 CDH16O75309 829 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 CA4P22748 312 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 RRM1P23921 792 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 APLFQ8IW19 511 aaPredicted RBP17.24■□□□□ 0.35
LINC00554-201ENST00000564841 MAML1Q92585 1016 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 HEMGNQ9BXL5 484 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 ARMCX1Q9P291 453 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 ATXN10Q9UBB4 475 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 ANAPC5Q9UJX4 755 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 R3HDM2Q9Y2K5 976 aaKnown RBP17.24■□□□□ 0.35
LINC00554-201ENST00000564841 MROH7Q68CQ1 1323 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 ADGRA3Q8IWK6 1321 aa17.24■□□□□ 0.35
LINC00554-201ENST00000564841 RNASEH1O60930 286 aaKnown RBP17.23■□□□□ 0.35
LINC00554-201ENST00000564841 BMP3P12645 472 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 KRT15P19012 456 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 NT5C2P49902 561 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 MDH1BQ5I0G3 518 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 PHLDB3Q6NSJ2 640 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 FOXR2Q6PJQ5 311 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 VPS52Q8N1B4 723 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 SLC25A41Q8N5S1 370 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 MCUR1Q96AQ8 359 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 TTC1Q99614 292 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 STK33Q9BYT3 514 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 MTUS1Q9ULD2 1270 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 ASTN2O75129 1339 aaPredicted RBP17.23■□□□□ 0.35
LINC00554-201ENST00000564841 BAG2O95816 211 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 CFBP00751 764 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 NMT1P30419 496 aaKnown RBP17.23■□□□□ 0.35
LINC00554-201ENST00000564841 AP1B1Q10567 949 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 MTM1Q13496 603 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 TATDN1Q6P1N9 297 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 SAMD7Q7Z3H4 446 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 RIBC1Q8N443 379 aaPredicted RBP17.23■□□□□ 0.35
LINC00554-201ENST00000564841 PDCD7Q8N8D1 485 aaKnown RBP17.23■□□□□ 0.35
LINC00554-201ENST00000564841 PPFIBP2Q8ND30 876 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 SLC5A5Q92911 643 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 KAT5Q92993 513 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 KLF6Q99612 283 aaPredicted RBP17.23■□□□□ 0.35
LINC00554-201ENST00000564841 ANO3Q9BYT9 981 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 TRABDQ9H4I3 376 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 HEY2Q9UBP5 337 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 TRAF3IP3Q9Y228 551 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 GCAP28676 217 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 PSMC4P43686 418 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 SLC12A3P55017 1021 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 MTMR2Q13614 643 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 FASTKD3Q14CZ7 662 aaKnown RBP17.23■□□□□ 0.35
LINC00554-201ENST00000564841 CFAP157Q5JU67 520 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 ANKRD35Q8N283 1001 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 DENND1AQ8TEH3 1009 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 STMN2Q93045 179 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 PCDHB18PQ96TA0 734 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 BTBD10Q9BSF8 475 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 KIAA1586Q9HCI6 787 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 TAS2R1Q9NYW7 299 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
LINC00554-201ENST00000564841 GOLGA8RI6L899 631 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 TRAFD1O14545 582 aaPredicted RBP17.22■□□□□ 0.35
LINC00554-201ENST00000564841 CALCAP01258 141 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 LIN52Q52LA3 116 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 MYLK4Q86YV6 388 aaPredicted RBP17.22■□□□□ 0.35
LINC00554-201ENST00000564841 TLE6Q9H808 572 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 CLIC5Q9NZA1 410 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 CHMP2BQ9UQN3 213 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 TNS1Q9HBL0 1735 aaKnown RBP17.22■□□□□ 0.35
LINC00554-201ENST00000564841 FAM86B1E9PN63 330 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 FAM86B2P0C5J1 330 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 FAM200BP0CF97 657 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 GRIA2P42262 883 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 CYP2J2P51589 502 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 SPARCL1Q14515 664 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 OLFML2BQ68BL8 750 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 TRABD2AQ86V40 505 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 FBXO11Q86XK2 927 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 AGPAT1Q99943 283 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 MKNK1Q9BUB5 465 aa17.22■□□□□ 0.35
LINC00554-201ENST00000564841 ASCC2Q9H1I8 757 aaPredicted RBP17.22■□□□□ 0.35
LINC00554-201ENST00000564841 TTC36A6NLP5 189 aa17.21■□□□□ 0.35
LINC00554-201ENST00000564841 STK10O94804 968 aaKnown RBP17.21■□□□□ 0.35
LINC00554-201ENST00000564841 LMNAP02545 664 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms