RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 ZNF560Q96MR9 790 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 PLXNA4Q9HCM2 1894 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 ADCY5O95622 1261 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 CA3P07451 260 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 WDR72Q3MJ13 1102 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 PHLDB3Q6NSJ2 640 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 DCLRE1AQ6PJP8 1040 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 KCNT2Q6UVM3 1135 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 SCARA5Q6ZMJ2 495 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 VWA8A3KMH1 1905 aa29.01■■■□□ 2.24
SH3GL3-205ENST00000563901 LINC01553A4QN01 128 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 TPM3P06753 285 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 MRE11P49959 708 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 MYO1EQ12965 1108 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 RRAGAQ7L523 313 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 KAT5Q92993 513 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 ZNF558Q96NG5 402 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 ARID3AQ99856 593 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 PBX4Q9BYU1 374 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 IMPG2Q9BZV3 1241 aa29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.01■■■□□ 2.23
SH3GL3-205ENST00000563901 KPNA7A9QM74 516 aa29■■■□□ 2.23
SH3GL3-205ENST00000563901 NOL4O94818 638 aa29■■■□□ 2.23
SH3GL3-205ENST00000563901 ATICP31939 592 aa29■■■□□ 2.23
SH3GL3-205ENST00000563901 ALDH7A1P49419 539 aaKnown RBP29■■■□□ 2.23
SH3GL3-205ENST00000563901 TIGD5Q53EQ6 642 aa29■■■□□ 2.23
SH3GL3-205ENST00000563901 WDR44Q5JSH3 913 aa29■■■□□ 2.23
SH3GL3-205ENST00000563901 NT5C1BQ96P26 610 aa29■■■□□ 2.23
SH3GL3-205ENST00000563901 SNX9Q9Y5X1 595 aa29■■■□□ 2.23
SH3GL3-205ENST00000563901 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 A0A1W2PQC6 194 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 LAG3P18627 525 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 RAP1GAPP47736 663 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 SV2CQ496J9 727 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 ZNF667Q5HYK9 610 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 CCDC150Q8NCX0 1101 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 GANQ9H2C0 597 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 PCDHA11Q9Y5I1 949 aa28.99■■■□□ 2.23
SH3GL3-205ENST00000563901 PNPLA4P41247 253 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 VSTM4Q8IW00 320 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 PPM1KQ8N3J5 372 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 CLP1Q92989 425 aaKnown RBP28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 COLEC11Q9BWP8 271 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 SMYD3Q9H7B4 428 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 VRTNQ9H8Y1 702 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 APEX2Q9UBZ4 518 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 ADAM28Q9UKQ2 775 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 FHOD1Q9Y613 1164 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 CHD9Q3L8U1 2897 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 TMEM189-UBE2V1I3L0A0 370 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 TADA2AO75478 443 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 STAU1O95793 577 aaKnown RBP28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 ASPAP45381 313 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 KLHDC7AQ5VTJ3 777 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 SLC39A11Q8N1S5 342 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 TAF4BQ92750 862 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 MRFAP1L1Q96HT8 127 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 C17orf80Q9BSJ5 609 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 SDCBP2Q9H190 292 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 MTUS1Q9ULD2 1270 aa28.98■■■□□ 2.23
SH3GL3-205ENST00000563901 AARSP49588 968 aaKnown RBP eCLIP28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 CDH8P55286 799 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 TNNC1P63316 161 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 IQCEQ6IPM2 695 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 IGSF21Q96ID5 467 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 SENP8Q96LD8 212 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 MMS19Q96T76 1030 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 GPR62Q9BZJ7 368 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 NIF3L1Q9GZT8 377 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 NKX2-4Q9H2Z4 354 aa28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 UBE2TQ9NPD8 197 aaPredicted RBP28.97■■■□□ 2.23
SH3GL3-205ENST00000563901 DSTYKQ6XUX3 929 aa28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 NEK11Q8NG66 645 aa28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 B3GALT6Q96L58 329 aa28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 KREMEN1Q96MU8 473 aa28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 VN1R3Q9BXE9 311 aa28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 PLCB1Q9NQ66 1216 aa28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 COLQQ9Y215 455 aaPredicted RBP28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 TIMM13Q9Y5L4 95 aaPredicted RBP28.96■■■□□ 2.23
SH3GL3-205ENST00000563901 CYB561D2O14569 222 aa28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 WEE2P0C1S8 567 aa28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 CTNNB1P35222 781 aa28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 POLR2FP61218 127 aaKnown RBP28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 TMC6Q7Z403 805 aa28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 NLRC4Q9NPP4 1024 aa28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 GDAP2Q9NXN4 497 aa28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 CHD7Q9P2D1 2997 aa28.95■■■□□ 2.23
SH3GL3-205ENST00000563901 UCHL3P15374 230 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 CUL2Q13617 745 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 SOWAHAQ2M3V2 549 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 FUT10Q6P4F1 479 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 TAS1R1Q7RTX1 841 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 DNAJC12Q9UKB3 198 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 L1RE1Q9UN81 338 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 RNF225M0QZC1 329 aaPredicted RBP28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 TRIM21P19474 475 aaKnown RBP28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 TAP1Q03518 808 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 ARHGAP44Q17R89 818 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 SPECC1LQ69YQ0 1117 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms