RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OR10H5Q8NGA6 315 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 PLBD2Q8NHP8 589 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 KLHDC4Q8TBB5 520 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 MORC4Q8TE76 937 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 CRAMP1Q96RY5 1269 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 MYH16Q9H6N6 1097 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 ARNT2Q9HBZ2 717 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 LMBRD1Q9NUN5 540 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 FBXO34Q9NWN3 711 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 JKAMPQ9P055 326 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 SORCS3Q9UPU3 1222 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 TCRBV7S2A1N4TA0A589 114 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 DRGXA6NNA5 263 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 A6NNZ2 444 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 F2RL2O00254 374 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 TRIM24O15164 1050 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 RECQL4O94761 1208 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 RHOBTB3O94955 611 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 SBK3P0C264 359 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 PROZP22891 400 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 SMARCA1P28370 1054 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 RAP2BP61225 183 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 FSTL1Q12841 308 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 UBE4AQ14139 1066 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 GALEQ14376 348 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 BRD3Q15059 726 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 PTPAQ15257 358 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 ANO6Q4KMQ2 910 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 FLYWCH1Q4VC44 716 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 LY6G5CQ5SRR4 150 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 EMC10Q5UCC4 262 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 METRNLQ641Q3 311 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 IL31Q6EBC2 164 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 CCSAPQ6IQ19 270 aaPredicted RBP4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 VRK3Q8IV63 474 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 RNF169Q8NCN4 708 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 CPT1CQ8TCG5 803 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 MLST8Q9BVC4 326 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 B3GNT5Q9BYG0 378 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM204AQ9H8W3 233 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 SPON1Q9HCB6 807 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 PNPOQ9NVS9 261 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 RLIMQ9NVW2 624 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 FEZ2Q9UHY8 353 aaPredicted RBP4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 L1RE1Q9UN81 338 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 HS3ST4Q9Y661 456 aa4.1□□□□□ -1.75
SHCBP1-202ENST00000563219 PLEKHD1A6NEE1 506 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 DIRC3C9JPN6 131 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 KIAA0391O15091 583 aaKnown RBP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 HAUS5O94927 633 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 SCAF4O95104 1147 aaKnown RBP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 ZBED1O96006 694 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 TGM1P22735 817 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 GCSHP23434 173 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 SLC6A4P31645 630 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 ADRA1BP35368 520 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 NEK3P51956 506 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 USP14P54578 494 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 RAB1AP62820 205 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 GPSM2P81274 684 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 OS9Q13438 667 aaPredicted RBP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 PLS1Q14651 629 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 NPNTQ6UXI9 565 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 ZNF365Q70YC5 407 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 UBE3BQ7Z3V4 1068 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 DAAM2Q86T65 1068 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 GPR150Q8NGU9 434 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 PROKR1Q8TCW9 393 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 MTFMTQ96DP5 389 aaKnown RBP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 SLC35A4Q96G79 324 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 PACSIN1Q9BY11 444 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 MRPL46Q9H2W6 279 aaKnown RBP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 DDX21Q9NR30 783 aaKnown RBP eCLIP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 GNL3LQ9NVN8 582 aaKnown RBP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 POGKQ9P215 609 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 ABCF2Q9UG63 623 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 PACSIN3Q9UKS6 424 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 ZDHHC8Q9ULC8 765 aa4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 FRMPD2Q68DX3 1309 aaPredicted RBP4.09□□□□□ -1.75
SHCBP1-202ENST00000563219 COL4A3Q01955 1670 aa4.09□□□□□ -1.76
SHCBP1-202ENST00000563219 CAPN8A6NHC0 703 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 AHRRA9YTQ3 701 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 H3BUI4 141 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 LEFTY2O00292 366 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 TPP1O14773 563 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 ABHD16AO95870 558 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 ANXA1P04083 346 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 MYL3P08590 195 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 BMP5P22003 454 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 ZFP36P26651 326 aaKnown RBP4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 PIK3CGP48736 1102 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 CHN2P52757 468 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 PTTG1IPP53801 180 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 NHLH2Q02577 135 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 HDAC1Q13547 482 aaPredicted RBP4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 FGL2Q14314 439 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 CCDC93Q567U6 631 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 CCDC157Q569K6 752 aa4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 FAM102AQ5T9C2 384 aaPredicted RBP4.08□□□□□ -1.76
SHCBP1-202ENST00000563219 AGAP9Q5VTM2 703 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms