RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 FAM84AQ96KN4 292 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 CLEC1BQ9P126 229 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 BARX2Q9UMQ3 279 aaPredicted RBP18.05■□□□□ 0.48
CLK3-207ENST00000562389 BACE2Q9Y5Z0 518 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 SPTLC1O15269 473 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 AKAP3O75969 853 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 CCNE1P24864 410 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 PMS1P54277 932 aaKnown RBP18.04■□□□□ 0.48
CLK3-207ENST00000562389 CLDN10P78369 228 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 MRPS5P82675 430 aaKnown RBP18.04■□□□□ 0.48
CLK3-207ENST00000562389 MRPL58Q14197 206 aaKnown RBP18.04■□□□□ 0.48
CLK3-207ENST00000562389 VARS2Q5ST30 1063 aaKnown RBP18.04■□□□□ 0.48
CLK3-207ENST00000562389 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 ZC3H3Q8IXZ2 948 aaKnown RBP18.04■□□□□ 0.48
CLK3-207ENST00000562389 CSGALNACT2Q8N6G5 542 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 LRRC52Q8N7C0 313 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 TMC2Q8TDI7 906 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 CLSTN3Q9BQT9 956 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 MKNK1Q9BUB5 465 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 SIX4Q9UIU6 781 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 AGAP1Q9UPQ3 857 aa18.04■□□□□ 0.48
CLK3-207ENST00000562389 ARHGEF37A1IGU5 675 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 LRRIQ3A6PVS8 624 aaPredicted RBP18.03■□□□□ 0.48
CLK3-207ENST00000562389 PPP1R3GB7ZBB8 358 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 H3BQ06 376 aaPredicted RBP18.03■□□□□ 0.48
CLK3-207ENST00000562389 H7C4K7 107 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 ODC1P11926 461 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 EPCAMP16422 314 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 RPL17P18621 184 aaKnown RBP18.03■□□□□ 0.48
CLK3-207ENST00000562389 TYMPP19971 482 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 PSMC2P35998 433 aaKnown RBP18.03■□□□□ 0.48
CLK3-207ENST00000562389 AP3M2P53677 418 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 RBP5P82980 135 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 ENPEPQ07075 957 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 SV2CQ496J9 727 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 ANKRD40Q6AI12 368 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 ANKRD54Q6NXT1 300 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 FOXR2Q6PJQ5 311 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 BORCS6Q96GS4 357 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 SENP8Q96LD8 212 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 POP1Q99575 1024 aaKnown RBP18.03■□□□□ 0.48
CLK3-207ENST00000562389 DZANK1Q9NVP4 752 aa18.03■□□□□ 0.48
CLK3-207ENST00000562389 TRIM49BA6NDI0 452 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 CETN3O15182 167 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 TBC1D4O60343 1298 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 MBD3O95983 291 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 GLUD1P00367 558 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 KRT19P08727 400 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 HOXB8P17481 243 aaPredicted RBP18.02■□□□□ 0.48
CLK3-207ENST00000562389 MCCD1P59942 119 aaPredicted RBP18.02■□□□□ 0.48
CLK3-207ENST00000562389 FKBP3Q00688 224 aaKnown RBP18.02■□□□□ 0.48
CLK3-207ENST00000562389 PUS10Q3MIT2 529 aaKnown RBP18.02■□□□□ 0.48
CLK3-207ENST00000562389 ZNF280DQ6N043 979 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 INTS8Q75QN2 995 aaKnown RBP18.02■□□□□ 0.48
CLK3-207ENST00000562389 TRAPPC11Q7Z392 1133 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 USP37Q86T82 979 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 FAM186BQ8IYM0 893 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 ZNF516Q92618 1163 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 ASB2Q96Q27 587 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 SPTBN5Q9NRC6 3674 aaKnown RBP18.02■□□□□ 0.48
CLK3-207ENST00000562389 CD207Q9UJ71 328 aa18.02■□□□□ 0.48
CLK3-207ENST00000562389 PRUNE2Q8WUY3 3088 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 BICDL2A1A5D9 508 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 KPNA7A9QM74 516 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 SLC16A3O15427 465 aaKnown RBP18.01■□□□□ 0.47
CLK3-207ENST00000562389 ADAM12O43184 909 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 TGM5O43548 720 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 OAZ2O95190 189 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 CYP11A1P05108 521 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 VAMP7P51809 220 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 YWHAHQ04917 246 aaPredicted RBP18.01■□□□□ 0.47
CLK3-207ENST00000562389 RAB33AQ14088 237 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 SCARA3Q6AZY7 606 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 SLC8B1Q6J4K2 584 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 KLHL10Q6JEL2 608 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 LILRA6Q6PI73 481 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 RSPO2Q6UXX9 243 aaPredicted RBP18.01■□□□□ 0.47
CLK3-207ENST00000562389 GLYCTKQ8IVS8 523 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 SMRP1Q8NCR6 262 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.01■□□□□ 0.47
CLK3-207ENST00000562389 HDAC7Q8WUI4 952 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 NELFBQ8WX92 580 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 OXCT2Q9BYC2 517 aaPredicted RBP18.01■□□□□ 0.47
CLK3-207ENST00000562389 DPP7Q9UHL4 492 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 DSEQ9UL01 958 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 CTNND2Q9UQB3 1225 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 R3HCC1Q9Y3T6 440 aaKnown RBP18.01■□□□□ 0.47
CLK3-207ENST00000562389 CDY1Q9Y6F8 540 aa18.01■□□□□ 0.47
CLK3-207ENST00000562389 CYB561D2O14569 222 aa18■□□□□ 0.47
CLK3-207ENST00000562389 IKBKBO14920 756 aa18■□□□□ 0.47
CLK3-207ENST00000562389 EPB41P11171 864 aaKnown RBP18■□□□□ 0.47
CLK3-207ENST00000562389 KRT13P13646 458 aa18■□□□□ 0.47
CLK3-207ENST00000562389 OR1D2P34982 312 aa18■□□□□ 0.47
CLK3-207ENST00000562389 DLG4P78352 724 aa18■□□□□ 0.47
CLK3-207ENST00000562389 BFSP1Q12934 665 aa18■□□□□ 0.47
CLK3-207ENST00000562389 MYO1EQ12965 1108 aa18■□□□□ 0.47
CLK3-207ENST00000562389 PAK1Q13153 545 aa18■□□□□ 0.47
CLK3-207ENST00000562389 SMAD4Q13485 552 aaKnown RBP18■□□□□ 0.47
CLK3-207ENST00000562389 CTXN3Q4LDR2 81 aa18■□□□□ 0.47
CLK3-207ENST00000562389 OVOS1Q6IE37 1185 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms