RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 A0A1B0GUA9 196 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 CAPN8A6NHC0 703 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 I3L4J1 428 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 PTGESO14684 152 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 TRDMT1O14717 391 aaKnown RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 TBX3O15119 743 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 ATXN7O15265 892 aaPredicted RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 ARHGAP6O43182 974 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 MAP3K13O43283 966 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 B4GALT5O43286 388 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 C1QL1O75973 258 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 RECQL4O94761 1208 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 SEC24AO95486 1093 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 CPB1P15086 417 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 USP11P51784 963 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 GFPT1Q06210 699 aaPredicted RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 TRIP6Q15654 476 aaKnown RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 CTXN3Q4LDR2 81 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 XKR9Q5GH70 373 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 PPP4R3AQ6IN85 833 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 ZNF280DQ6N043 979 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 ARMCX6Q7L4S7 300 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 SGMS1Q86VZ5 419 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 SYT12Q8IV01 421 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 CCDC43Q96MW1 224 aaKnown RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 ADPGKQ9BRR6 497 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 LRRC2Q9BYS8 371 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 ATXN3LQ9H3M9 355 aa10.52□□□□□ -0.73
HERC1-210ENST00000560897 AFF4Q9UHB7 1163 aaKnown RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 APOBEC2Q9Y235 224 aaKnown RBP10.52□□□□□ -0.73
HERC1-210ENST00000560897 MYO18BQ8IUG5 2567 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 GOLGA8AA7E2F4 631 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 GOLGA8BA8MQT2 603 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 TNFRSF10BO14763 440 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 SYN3O14994 580 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 N4BP3O15049 544 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 ZBTB43O43298 467 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 FGF19O95750 216 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
HERC1-210ENST00000560897 BCKDHBP21953 392 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 YWHABP31946 246 aaKnown RBP10.51□□□□□ -0.73
HERC1-210ENST00000560897 BRCC3P46736 316 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 CLCNKBP51801 687 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 EPHB3P54753 998 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 FAM193AP78312 1265 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 POU5F1BQ06416 359 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 HDAC1Q13547 482 aaPredicted RBP10.51□□□□□ -0.73
HERC1-210ENST00000560897 AMHR2Q16671 573 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 Q4G0T1 1027 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 GPR158Q5T848 1215 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 ANO7Q6IWH7 933 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 SLC23A3Q6PIS1 610 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 TTC30AQ86WT1 665 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 SPRYD3Q8NCJ5 442 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 LSM14AQ8ND56 463 aaKnown RBP10.51□□□□□ -0.73
HERC1-210ENST00000560897 CCDC148Q8NFR7 591 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 GCNAQ96QF7 691 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 YIPF1Q9Y548 306 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 NUB1Q9Y5A7 615 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 ARID2Q68CP9 1835 aa10.51□□□□□ -0.73
HERC1-210ENST00000560897 SPTA1P02549 2419 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 PLXNB3Q9ULL4 1909 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 UNC79Q9P2D8 2635 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 MARCH6O60337 910 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 ALDH1A2O94788 518 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 ALDH1A3P47895 512 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 CYP4A11Q02928 519 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 RUNX3Q13761 415 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 CAPSQ13938 189 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 GLRA4Q5JXX5 417 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 STXBP5Q5T5C0 1151 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 LYSMD4Q5XG99 296 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 CC2D1AQ6P1N0 951 aaPredicted RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 APOA5Q6Q788 366 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 RABEPKQ7Z6M1 372 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 CHD1LQ86WJ1 897 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 SCUBE3Q8IX30 993 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 PNPLA1Q8N8W4 532 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 ZNF579Q8NAF0 562 aaKnown RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 CEP76Q8TAP6 659 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 PIP4K2CQ8TBX8 421 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 CRELD1Q96HD1 420 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 CNOT6LQ96LI5 555 aaKnown RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 HNRNPABQ99729 332 aaKnown RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 P2RY13Q9BPV8 354 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 NFKBIZQ9BYH8 718 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 C22orf23Q9BZE7 217 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 CLMPQ9H6B4 373 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 PRMT7Q9NVM4 692 aaPredicted RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 DKK4Q9UBT3 224 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms