RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 GPIHBP1Q8IV16 184 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 TNFRSF25Q93038 417 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 ADPGKQ9BRR6 497 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
TPM1-225ENST00000560679 DNAJC25Q9H1X3 360 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 C2orf40Q9H1Z8 148 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 SLITRK6Q9H5Y7 841 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 GTSE1Q9NYZ3 720 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 AFF4Q9UHB7 1163 aaKnown RBP10.89□□□□□ -0.67
TPM1-225ENST00000560679 YIPF1Q9Y548 306 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 SETXQ7Z333 2677 aaKnown RBP10.88□□□□□ -0.67
TPM1-225ENST00000560679 GCN1Q92616 2671 aaKnown RBP10.88□□□□□ -0.67
TPM1-225ENST00000560679 A0A1W2PRU2 124 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 CPLX1O14810 134 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 SYN3O14994 580 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 CDC45O75419 566 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 PRAMEF12O95522 483 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 LIG1P18858 919 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
TPM1-225ENST00000560679 TNK2Q07912 1038 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 ZNF252P-AS1Q0IIN9 211 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 STK3Q13188 491 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 NR5A1Q13285 461 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 TMEM132AQ24JP5 1023 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 RNF43Q68DV7 783 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 IQCEQ6IPM2 695 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 ALKAL1Q6UXT8 129 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 RNF19BQ6ZMZ0 732 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 ELMOD1Q8N336 334 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 MCPH1Q8NEM0 835 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 BEST2Q8NFU1 509 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 GATA6Q92908 595 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 CHFRQ96EP1 664 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 ZNF512Q96ME7 567 aaPredicted RBP10.88□□□□□ -0.67
TPM1-225ENST00000560679 NAP1L4Q99733 375 aaKnown RBP10.88□□□□□ -0.67
TPM1-225ENST00000560679 CRISPLD1Q9H336 500 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 POLR3BQ9NW08 1133 aaPredicted RBP10.88□□□□□ -0.67
TPM1-225ENST00000560679 PCDHGA5Q9Y5G8 931 aa10.88□□□□□ -0.67
TPM1-225ENST00000560679 KIAA1549LQ6ZVL6 1849 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 CCDC163A0A0D9SF12 145 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 H7C4K7 107 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
TPM1-225ENST00000560679 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 NAMPTP43490 491 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
TPM1-225ENST00000560679 FOXC1Q12948 553 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 CALCRLQ16602 461 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 CTXN3Q4LDR2 81 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 ATF7IP2Q5U623 682 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 ARID3BQ8IVW6 561 aaPredicted RBP10.87□□□□□ -0.67
TPM1-225ENST00000560679 YAF2Q8IY57 180 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 SYNPOQ8N3V7 929 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 E2F7Q96AV8 911 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 C18orf25Q96B23 403 aaPredicted RBP10.87□□□□□ -0.67
TPM1-225ENST00000560679 ZNF274Q96GC6 653 aaPredicted RBP10.87□□□□□ -0.67
TPM1-225ENST00000560679 ZC3H10Q96K80 434 aaKnown RBP10.87□□□□□ -0.67
TPM1-225ENST00000560679 SUSD3Q96L08 255 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 EDEM2Q9BV94 578 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 ADAM33Q9BZ11 813 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 CDT1Q9H211 546 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 TTC12Q9H892 705 aaPredicted RBP10.87□□□□□ -0.67
TPM1-225ENST00000560679 VPS45Q9NRW7 570 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
TPM1-225ENST00000560679 STK36Q9NRP7 1315 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 TSC2P49815 1807 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 CITO14578 2027 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 SRRM3A6NNA2 597 aaPredicted RBP10.86□□□□□ -0.67
TPM1-225ENST00000560679 MED24O75448 989 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 AKAP3O75969 853 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 CCDC192P0DO97 292 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 XRCC6P12956 609 aaKnown RBP eCLIP10.86□□□□□ -0.67
TPM1-225ENST00000560679 GRM5P41594 1212 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 PLK5Q496M5 336 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 GAREM2Q75VX8 874 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 RUFY3Q7L099 469 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 CATSPER3Q86XQ3 398 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 DEPTORQ8TB45 409 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 MTMR9Q96QG7 549 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
TPM1-225ENST00000560679 DUSP15Q9H1R2 295 aaPredicted RBP10.86□□□□□ -0.67
TPM1-225ENST00000560679 MYO16Q9Y6X6 1858 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 CELSR3Q9NYQ7 3312 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 LNP1A1A4G5 178 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 C4orf47A7E2U8 309 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 ABLIM1O14639 778 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 NEMFO60524 1076 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 OR4Q2P0C623 313 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 CPB1P15086 417 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 KCNE1P15382 129 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 CYP11B2P19099 503 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 PSMA5P28066 241 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 OSTNP61366 133 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 RING1Q06587 406 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 SCRN1Q12765 414 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 ARHGAP29Q52LW3 1261 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 TMEM196Q5HYL7 178 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 SH3PXD2AQ5TCZ1 1133 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms