RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 SPINK2P20155 84 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 MPLP40238 635 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 FOXC1Q12948 553 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 DCAF4L1Q3SXM0 396 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 SYNPOQ8N3V7 929 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 OXER1Q8TDS5 423 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 ZFYVE19Q96K21 471 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 ZC3H10Q96K80 434 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 NAP1L4Q99733 375 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 LRRC3Q9BY71 257 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 GPR88Q9GZN0 384 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 C2orf40Q9H1Z8 148 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 SLITRK6Q9H5Y7 841 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 VPS45Q9NRW7 570 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 PPP4R2Q9NY27 417 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 AFF4Q9UHB7 1163 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 PCDHGA5Q9Y5G8 931 aa14.08□□□□□ -0.16
RABGGTA-213ENST00000560127 ADAMTS20P59510 1910 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 CCDC163A0A0D9SF12 145 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 FAM205CA6NFA0 338 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 SRRM3A6NNA2 597 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 H7C4K7 107 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 PODXLO00592 558 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 CCDC192P0DO97 292 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 XRCC6P12956 609 aaKnown RBP eCLIP14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 LIG1P18858 919 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 HSPA4P34932 840 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 STXBP5Q5T5C0 1151 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 ERICH6BQ5W0A0 696 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 MCPH1Q8NEM0 835 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 ADAM33Q9BZ11 813 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 GJB4Q9NTQ9 266 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 PCDHA12Q9UN75 941 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 BPTFQ12830 3046 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 PTPRDP23468 1912 aa14.07□□□□□ -0.16
RABGGTA-213ENST00000560127 MYH11P35749 1972 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 A0A1W2PRU2 124 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 CPLX1O14810 134 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 ATP2B1P20020 1258 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 ZNF252P-AS1Q0IIN9 211 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 CTXN3Q4LDR2 81 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 XKR4Q5GH76 650 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 NT5DC1Q5TFE4 455 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 LRSAM1Q6UWE0 723 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 ALKAL1Q6UXT8 129 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 RNF19BQ6ZMZ0 732 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 TMC8Q8IU68 726 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 ARID3BQ8IVW6 561 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 CEP120Q8N960 986 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 FAM200AQ8TCP9 573 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 GATA6Q92908 595 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 ZMAT2Q96NC0 199 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 MKNK1Q9BUB5 465 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 EDEM2Q9BV94 578 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 MAFFQ9ULX9 164 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 ASXL3Q9C0F0 2248 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 OBSL1O75147 1896 aa14.06□□□□□ -0.16
RABGGTA-213ENST00000560127 TMEM8BA6NDV4 472 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 C4orf47A7E2U8 309 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 SOBPA7XYQ1 873 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 AKAP3O75969 853 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 VNN2O95498 520 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 SPATA31C1P0DKV0 1188 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 PLK5Q496M5 336 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 ARHGAP29Q52LW3 1261 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 LARP6Q9BRS8 491 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 KIFC3Q9BVG8 833 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 DNAJC25Q9H1X3 360 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 TTC12Q9H892 705 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 YIPF1Q9Y548 306 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 CELSR3Q9NYQ7 3312 aa14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 MYO18AQ92614 2054 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-213ENST00000560127 APC2O95996 2303 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 NAMPTP43490 491 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 RING1Q06587 406 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 TNK2Q07912 1038 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 SH3PXD2AQ5TCZ1 1133 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 ATF7IP2Q5U623 682 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 ZNF280DQ6N043 979 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 BEST2Q8NFU1 509 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 DEPTORQ8TB45 409 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 DDX12PQ92771 950 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 ZNF274Q96GC6 653 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 SUSD3Q96L08 255 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 DUSP15Q9H1R2 295 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 CRISPLD1Q9H336 500 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 POLR3BQ9NW08 1133 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 NUB1Q9Y5A7 615 aa14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 ASH1LQ9NR48 2969 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-213ENST00000560127 CDC45O75419 566 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 CPB1P15086 417 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 PSMA5P28066 241 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 GRM5P41594 1212 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 TXKP42681 527 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 STK3Q13188 491 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 CALCRLQ16602 461 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms