RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 HERVK_113Q902F9 699 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 DDX27Q96GQ7 796 aaKnown RBP11.2□□□□□ -0.62
TPM1-221ENST00000559831 KREMEN1Q96MU8 473 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 UROC1Q96N76 676 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 PAAF1Q9BRP4 392 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 EDEM3Q9BZQ6 932 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 NIF3L1Q9GZT8 377 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 MTIF3Q9H2K0 278 aaKnown RBP11.2□□□□□ -0.62
TPM1-221ENST00000559831 CXXC1Q9P0U4 656 aaPredicted RBP11.2□□□□□ -0.62
TPM1-221ENST00000559831 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 SLC4A7Q9Y6M7 1214 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 NLRC5Q86WI3 1866 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 TSC2P49815 1807 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 LRRC53A6NM62 1247 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 STAU1O95793 577 aaKnown RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 PNMA6AP0CW24 399 aaPredicted RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 TBXAS1P24557 533 aaPredicted RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 DEKP35659 375 aaKnown RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 USP8P40818 1118 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 PNPLA4P41247 253 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 GSDMDP57764 484 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 ZBED6P86452 979 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 DSC1Q08554 894 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 DRAP1Q14919 205 aaPredicted RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 UPP1Q16831 310 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 SPOUT1Q5T280 376 aaKnown RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 SFMBT2Q5VUG0 894 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 COLGALT2Q8IYK4 626 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 HASPINQ8TF76 798 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 BAP1Q92560 729 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 FAM81BQ96LP2 452 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 MMS19Q96T76 1030 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 YME1L1Q96TA2 773 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 ARID3AQ99856 593 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 ZBED2Q9BTP6 218 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 NAA15Q9BXJ9 866 aaKnown RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 STK33Q9BYT3 514 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 SMYD3Q9H7B4 428 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 NRDE2Q9H7Z3 1164 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 DNAJB4Q9UDY4 337 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 FBXL5Q9UKA1 691 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 PRG3Q9Y2Y8 225 aaPredicted RBP11.19□□□□□ -0.62
TPM1-221ENST00000559831 DAAM1Q9Y4D1 1078 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 SNX9Q9Y5X1 595 aa11.19□□□□□ -0.62
TPM1-221ENST00000559831 KPNA7A9QM74 516 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 F8W810 466 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 SPTLC1O15269 473 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 B3GAT3O94766 335 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 GFPT2O94808 682 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 KIF4AO95239 1232 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 WEE2P0C1S8 567 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 KRT5P13647 590 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 CD58P19256 250 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 IGFBP6P24592 240 aaPredicted RBP11.18□□□□□ -0.62
TPM1-221ENST00000559831 STAT1P42224 750 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 ASPAP45381 313 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 JAM2P57087 298 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 GCNT1Q02742 428 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 ARID5AQ03989 594 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
TPM1-221ENST00000559831 ASIC2Q16515 512 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 DSTYKQ6XUX3 929 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 ENOSF1Q7L5Y1 443 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 CMTR2Q8IYT2 770 aaKnown RBP11.18□□□□□ -0.62
TPM1-221ENST00000559831 TC2NQ8N9U0 490 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 C3orf58Q8NDZ4 430 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 OR8K1Q8NGG5 319 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 RSPH1Q8WYR4 309 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 SLC9A7Q96T83 725 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 VRTNQ9H8Y1 702 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 ABHD10Q9NUJ1 306 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 PCDHB4Q9Y5E5 795 aa11.18□□□□□ -0.62
TPM1-221ENST00000559831 F8VZ95 297 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 I3L4J1 428 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 FOXN3O00409 490 aaPredicted RBP11.17□□□□□ -0.62
TPM1-221ENST00000559831 CYB561D2O14569 222 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 GJB5O95377 273 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 ITGB1P05556 798 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 ATP2A2P16615 1042 aaKnown RBP11.17□□□□□ -0.62
TPM1-221ENST00000559831 SOX5P35711 763 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 PBX3P40426 434 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 BRCC3P46736 316 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 SLC11A1P49279 550 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 CDH8P55286 799 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 LILRA4P59901 499 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 YWHAEP62258 255 aaKnown RBP11.17□□□□□ -0.62
TPM1-221ENST00000559831 C9orf50Q5SZB4 431 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 HERC6Q8IVU3 1022 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 ZNF689Q96CS4 500 aaPredicted RBP11.17□□□□□ -0.62
TPM1-221ENST00000559831 SENP8Q96LD8 212 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 RNPC3Q96LT9 517 aaKnown RBP11.17□□□□□ -0.62
TPM1-221ENST00000559831 TMEM175Q9BSA9 504 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 COLEC11Q9BWP8 271 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 BCO2Q9BYV7 579 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 GPR88Q9GZN0 384 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 SDCBP2Q9H190 292 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms