RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 STK39Q9UEW8 545 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 PCDHA12Q9UN75 941 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 USP20Q9Y2K6 914 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 GIT1Q9Y2X7 761 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 GPSM3Q9Y4H4 160 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 CLUHO75153 1309 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 ZMYM2Q9UBW7 1377 aa6.43□□□□□ -1.38
USP3-215ENST00000559771 FANCMQ8IYD8 2048 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 SPTBN4Q9H254 2564 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 ANHXE9PGG2 379 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 CDKL5O76039 1030 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 KIF4AO95239 1232 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 NPTXRO95502 500 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 GLUD1P00367 558 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 C1RP00736 705 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 LAMP2P13473 410 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 GLULP15104 373 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 KRT2P35908 639 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 CD97P48960 835 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 HTR4Q13639 388 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 CALCRLQ16602 461 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 SLC27A1Q6PCB7 646 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 CYP26C1Q6V0L0 522 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 C8orf86Q6ZUL3 223 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 CATSPER3Q86XQ3 398 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 GPR65Q8IYL9 337 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 DTWD2Q8NBA8 298 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 TMEM87AQ8NBN3 555 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 FLCNQ8NFG4 579 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 LNX1Q8TBB1 728 aaPredicted RBP6.42□□□□□ -1.38
USP3-215ENST00000559771 HDAC7Q8WUI4 952 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 SMG7Q92540 1137 aaKnown RBP6.42□□□□□ -1.38
USP3-215ENST00000559771 NAP1L4Q99733 375 aaKnown RBP6.42□□□□□ -1.38
USP3-215ENST00000559771 CLSTN3Q9BQT9 956 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 FAM117AQ9C073 453 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 ZCCHC2Q9C0B9 1178 aaKnown RBP6.42□□□□□ -1.38
USP3-215ENST00000559771 CCDC113Q9H0I3 377 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 IRF2BPLQ9H1B7 796 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 POLR3FQ9H1D9 316 aaPredicted RBP6.42□□□□□ -1.38
USP3-215ENST00000559771 CRISPLD1Q9H336 500 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 PDZD7Q9H5P4 517 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 IGSF9Q9P2J2 1179 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 WNT16Q9UBV4 365 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 ADAM28Q9UKQ2 775 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 HRH3Q9Y5N1 445 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 TRIP11Q15643 1979 aa6.42□□□□□ -1.38
USP3-215ENST00000559771 PATJQ8NI35 1801 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 SHISA7A6NL88 538 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 C9orf172C9J069 976 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 MEFVO15553 781 aaPredicted RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 NEMFO60524 1076 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 USO1O60763 962 aaKnown RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 MED26O95402 600 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 BAG4O95429 457 aaKnown RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 SRFP11831 508 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 XRCC6P12956 609 aaKnown RBP eCLIP6.41□□□□□ -1.38
USP3-215ENST00000559771 NID1P14543 1247 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 SSTR4P31391 388 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 ANAPC15P60006 121 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 NTHL1P78549 312 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 GRIK3Q13003 919 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 TUSC3Q13454 348 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 TFDP1Q14186 410 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 HSP90AA2PQ14568 343 aaPredicted RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 ANGPT1Q15389 498 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 ECM1Q16610 540 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 FAM187BQ17R55 369 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 USP41Q3LFD5 358 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 EFHC2Q5JST6 749 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 EEF1DP3Q658K8 133 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 RSPO2Q6UXX9 243 aaPredicted RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 MAEAQ7L5Y9 396 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 GLYCTKQ8IVS8 523 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 DIS3L2Q8IYB7 885 aaKnown RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 MAML2Q8IZL2 1156 aaPredicted RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 C4orf32Q8N8J7 132 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 C3orf58Q8NDZ4 430 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 GPR152Q8TDT2 470 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 HASPINQ8TF76 798 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 RIN2Q8WYP3 895 aaPredicted RBP6.41□□□□□ -1.38
USP3-215ENST00000559771 FGF14Q92915 247 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 COLEC11Q9BWP8 271 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 MFSD1Q9H3U5 465 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 PLEKHA4Q9H4M7 779 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 POLD4Q9HCU8 107 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 ZDHHC7Q9NXF8 308 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 SNTG2Q9NY99 539 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 PARP2Q9UGN5 583 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 FBXW11Q9UKB1 542 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 SSX2IPQ9Y2D8 614 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 STARD13Q9Y3M8 1113 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 NUMBLQ9Y6R0 609 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 COL4A2P08572 1712 aa6.41□□□□□ -1.38
USP3-215ENST00000559771 CASTOR2A6NHX0 329 aa6.4□□□□□ -1.38
USP3-215ENST00000559771 MARCH6O60337 910 aa6.4□□□□□ -1.38
USP3-215ENST00000559771 EIF5BO60841 1220 aaKnown RBP6.4□□□□□ -1.38
USP3-215ENST00000559771 LRRN2O75325 713 aa6.4□□□□□ -1.38
USP3-215ENST00000559771 RECQL4O94761 1208 aa6.4□□□□□ -1.38
USP3-215ENST00000559771 XBP1P17861 261 aa6.4□□□□□ -1.38
USP3-215ENST00000559771 GBP2P32456 591 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms