RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 SURF1Q15526 300 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 IFI16Q16666 785 aaKnown RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 EXOC3L4Q17RC7 722 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 ZC2HC1CQ53FD0 456 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 UBXN11Q5T124 520 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 C10orf76Q5T2E6 689 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 GBP6Q6ZN66 633 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 SLC24A5Q71RS6 500 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 MRPL10Q7Z7H8 261 aaKnown RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 SYCP3Q8IZU3 236 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 RNF10Q8N5U6 811 aaKnown RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 RUBCNQ92622 972 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 CAPZA3Q96KX2 299 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 SLC9A7Q96T83 725 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 RAD9AQ99638 391 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 LACRTQ9GZZ8 138 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 GANQ9H2C0 597 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 MTIF3Q9H2K0 278 aaKnown RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 PLCB1Q9NQ66 1216 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 TOPORSQ9NS56 1045 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 MTMR10Q9NXD2 777 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 SNX12Q9UMY4 172 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 DERAQ9Y315 318 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 DAAM1Q9Y4D1 1078 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 REV3LO60673 3130 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 PRRC2BQ5JSZ5 2229 aaKnown RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 EPOPA6NHQ4 379 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 ZBBXA8MT70 800 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 ZNF263O14978 683 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 PMM2O15305 246 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 EXTL3O43909 919 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 DGKIO75912 1065 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 CLTAP09496 248 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 PRLRP16471 622 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 DNAJB2P25686 324 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 PSMC2P35998 433 aaKnown RBP8.25□□□□□ -1.09
LRRC28-211ENST00000558890 PLA2G4AP47712 749 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 AP3M2P53677 418 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 CLDN10P78369 228 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 GFPT1Q06210 699 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-211ENST00000558890 ZNF568Q3ZCX4 644 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 XKR4Q5GH76 650 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 TCERG1LQ5VWI1 586 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 WDR93Q6P2C0 686 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 SLC39A4Q6P5W5 647 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 INTS8Q75QN2 995 aaKnown RBP8.25□□□□□ -1.09
LRRC28-211ENST00000558890 Q7L0L9 218 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 ZNF771Q7L3S4 317 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-211ENST00000558890 FAM186BQ8IYM0 893 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 GPD1LQ8N335 351 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 XXYLT1Q8NBI6 393 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 TMC2Q8TDI7 906 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 PGBD4Q96DM1 585 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 BICD1Q96G01 975 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 GUCD1Q96NT3 240 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 ADAM2Q99965 735 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 CRACR2AQ9BSW2 395 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.25□□□□□ -1.09
LRRC28-211ENST00000558890 KIFC3Q9BVG8 833 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 CDT1Q9H211 546 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 PDZD7Q9H5P4 517 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 ASB7Q9H672 318 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 TMEM161AQ9NX61 479 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 AIPL1Q9NZN9 384 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 AGO2Q9UKV8 859 aaKnown RBP8.25□□□□□ -1.09
LRRC28-211ENST00000558890 TFR2Q9UP52 801 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 PIN4Q9Y237 131 aaKnown RBP8.25□□□□□ -1.09
LRRC28-211ENST00000558890 GINS2Q9Y248 185 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 FRMD4BQ9Y2L6 1034 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 CAPN6Q9Y6Q1 641 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 ATP8B3O60423 1300 aa8.25□□□□□ -1.09
LRRC28-211ENST00000558890 TMEM265A0A087WTH1 108 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 LINC01553A4QN01 128 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 LPXNO60711 386 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 N4BP1O75113 896 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 AKAP3O75969 853 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 NOL4O94818 638 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 IL18RAPO95256 599 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 CCDC172P0C7W6 258 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 STAG3L1P0CL83 205 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 FERP16591 822 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 OAS2P29728 719 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 ADSSP30520 456 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 GTF2H1P32780 548 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 VSNL1P62760 191 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 TAP1Q03518 808 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 ITIH3Q06033 890 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 PDAP1Q13442 181 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 SMC1AQ14683 1233 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 SLC18A3Q16572 532 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 ASTE1Q2TB18 679 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 HSP90B2PQ58FF3 399 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 HGSNATQ68CP4 663 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 NPAS4Q8IUM7 802 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 GPIHBP1Q8IV16 184 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 BRSK2Q8IWQ3 736 aa8.24□□□□□ -1.09
LRRC28-211ENST00000558890 NOA1Q8NC60 698 aaKnown RBP8.24□□□□□ -1.09
LRRC28-211ENST00000558890 POMGNT1Q8WZA1 660 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms