RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 CCDC195A0A1B0GUA6 201 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 ANO9A1A5B4 782 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 PDXKO00764 312 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 TGFB1I1O43294 461 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 OAZ2O95190 189 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 SMC2O95347 1197 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 PAPLNO95428 1278 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 HNRNPA1P09651 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
TPM1-213ENST00000558400 ALADP13716 330 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 TYMPP19971 482 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 TKTP29401 623 aaKnown RBP9.17□□□□□ -0.94
TPM1-213ENST00000558400 CASP1P29466 404 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 ELF1P32519 619 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 OR1D2P34982 312 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 HOXD13P35453 343 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 AARSP49588 968 aaKnown RBP eCLIP9.17□□□□□ -0.94
TPM1-213ENST00000558400 YWHAHQ04917 246 aaPredicted RBP9.17□□□□□ -0.94
TPM1-213ENST00000558400 ZP2Q05996 745 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 DPYDQ12882 1025 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 STK4Q13043 487 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 DUOXA2Q1HG44 320 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 VARS2Q5ST30 1063 aaKnown RBP9.17□□□□□ -0.94
TPM1-213ENST00000558400 RARS2Q5T160 578 aaKnown RBP9.17□□□□□ -0.94
TPM1-213ENST00000558400 C9orf57Q5W0N0 161 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 TPGS2Q68CL5 300 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 SLC8B1Q6J4K2 584 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 ZNF280DQ6N043 979 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 DSTYKQ6XUX3 929 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 CCDC149Q6ZUS6 474 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 GRAMD1CQ8IYS0 662 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 FMR1NBQ8N0W7 255 aaPredicted RBP9.17□□□□□ -0.94
TPM1-213ENST00000558400 C3orf58Q8NDZ4 430 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 SAAL1Q96ER3 474 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 ANKRD36BP1Q96IX9 119 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 GSDMAQ96QA5 445 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 FNBP1Q96RU3 617 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 FGFBP2Q9BYJ0 223 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 PCIF1Q9H4Z3 704 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 MAN1C1Q9NR34 630 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 AGPAT3Q9NRZ7 376 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 RMND1Q9NWS8 449 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 HSPBP1Q9NZL4 362 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 TUBGCP4Q9UGJ1 667 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 USTQ9Y2C2 406 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 KMT2EQ8IZD2 1858 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 SPTBN4Q9H254 2564 aa9.17□□□□□ -0.94
TPM1-213ENST00000558400 GOLGA8IPA6NC78 632 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 OR6C75A6NL08 312 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 GOLGA8JA6NMD2 632 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 CALUO43852 315 aaPredicted RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 TBC1D4O60343 1298 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 ZMYND10O75800 440 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 ABLIM3O94929 683 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 TNNC2P02585 160 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 NFICP08651 508 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 TMEM191BP0C7N4 346 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 ODC1P11926 461 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 RPL17P18621 184 aaKnown RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 RPL13P26373 211 aaKnown RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 HOXA9P31269 272 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 TAF6P49848 677 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 AP3M2P53677 418 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 RBP5P82980 135 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 TFAMQ00059 246 aaKnown RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 SNW1Q13573 536 aaKnown RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 SNRNP35Q16560 246 aaKnown RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 SV2CQ496J9 727 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 CTXN3Q4LDR2 81 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 LIN9Q5TKA1 542 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 TMC5Q6UXY8 1006 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 METTL23Q86XA0 190 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 SLC9A9Q8IVB4 645 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 NELFCDQ8IXH7 590 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 THEM5Q8N1Q8 247 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 CSGALNACT2Q8N6G5 542 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 C12orf76Q8N812 135 aaPredicted RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 GLIS3Q8NEA6 775 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 ENGASEQ8NFI3 743 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 NOC3LQ8WTT2 800 aaKnown RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 SLC39A7Q92504 469 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 ACSF2Q96CM8 615 aaPredicted RBP9.16□□□□□ -0.94
TPM1-213ENST00000558400 SENP8Q96LD8 212 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 ZNF560Q96MR9 790 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 IKZF4Q9H2S9 585 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 GOLPH3LQ9H4A5 285 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 PIDD1Q9HB75 910 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 PDE11AQ9HCR9 933 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 INTS13Q9NVM9 706 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 ITGA11Q9UKX5 1188 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 CDY1Q9Y6F8 540 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
TPM1-213ENST00000558400 MYH15Q9Y2K3 1946 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 CACNA1BQ00975 2339 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 KPNA7A9QM74 516 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 LOC730098B7Z3J9 87 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 I3L4J1 428 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 CYB561D2O14569 222 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms