RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TMEM106CQ9BVX2 250 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 PSTPIP2Q9H939 334 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 SAYSD1Q9NPB0 183 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 TMOD2Q9NZR1 351 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 HEY2Q9UBP5 337 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 COL5A3P25940 1745 aaPredicted RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 CCDC160A6NGH7 325 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L15C9J2P7 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L13C9JLJ4 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L11C9JVI0 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L18D6R9N7 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L22D6RA61 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L17D6RBQ6 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L19D6RCP7 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L20D6RJB6 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ASMTLO95671 621 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 SETSIPP0DME0 302 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 RPS12P25398 132 aaKnown RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 OCRLQ01968 901 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L24Q0WX57 530 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 AP1B1Q10567 949 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 PPP2R5CQ13362 524 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 LRRC36Q1X8D7 754 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 C6orf163Q5TEZ5 329 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 USP17L6PQ6QN14 398 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 OTOAQ7RTW8 1153 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 CTU1Q7Z7A3 348 aaKnown RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 CATSPER3Q86XQ3 398 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 CLEC10AQ8IUN9 316 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ZC3H3Q8IXZ2 948 aaKnown RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 SYT2Q8N9I0 419 aaPredicted RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 GRK7Q8WTQ7 553 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 WDR60Q8WVS4 1066 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 RBM15Q96T37 977 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 TIPINQ9BVW5 301 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ARL8BQ9NVJ2 186 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 GALNT8Q9NY28 637 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 TNRC6CQ9HCJ0 1690 aaKnown RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 GTPBP10A4D1E9 387 aaKnown RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 GOLGA8RI6L899 631 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 GSC2O15499 205 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 EDIL3O43854 480 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ZBED4O75132 1171 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ZWINTO95229 277 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 LYNP07948 512 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 RRM1P23921 792 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 PGM1P36871 562 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 MAGEA4P43358 317 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 MAP7Q14244 749 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 SLC1A5Q15758 541 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 PDK4Q16654 411 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 CYP1B1Q16678 543 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 SLC45A4Q5BKX6 768 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 MDH1BQ5I0G3 518 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 SLC10A5Q5PT55 438 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ST13P4Q8IZP2 240 aaPredicted RBP5.36□□□□□ -1.55
HMG20A-204ENST00000558288 RFWD2Q8NHY2 731 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 HIC2Q96JB3 615 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 CFAP57Q96MR6 1250 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 CSRNP1Q96S65 589 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 PREBQ9HCU5 417 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ACP6Q9NPH0 428 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ANKFY1Q9P2R3 1169 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ATXN10Q9UBB4 475 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 LGALS13Q9UHV8 139 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 ANGPTL2Q9UKU9 493 aa5.36□□□□□ -1.55
HMG20A-204ENST00000558288 SBF1O95248 1867 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ARFGEF1Q9Y6D6 1849 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TXNDC9O14530 226 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CIB2O75838 187 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TPP2P29144 1249 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CCNFP41002 786 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ARFIP2P53365 341 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 RTP1P59025 263 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 DSG1Q02413 1049 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CAV1Q03135 178 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 CETN1Q12798 172 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 NR1H3Q13133 447 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 OLFML2BQ68BL8 750 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 PODNQ7Z5L7 613 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 FBXO33Q7Z6M2 555 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TRABD2AQ86V40 505 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 KBTBD2Q8IY47 623 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ARHGAP24Q8N264 748 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SH3TC2Q8TF17 1288 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF296Q8WUU4 475 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF75CPQ92670 426 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SLC5A5Q92911 643 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 NSL1Q96IY1 281 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TUBGCP5Q96RT8 1024 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 SPATA16Q9BXB7 569 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 TRIM55Q9BYV6 548 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 LRRC19Q9H756 370 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 ZWILCHQ9H900 591 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 KIAA1586Q9HCI6 787 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 FBXO6Q9NRD1 293 aaPredicted RBP5.35□□□□□ -1.55
HMG20A-204ENST00000558288 GRID1Q9ULK0 1009 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 RPS6KL1Q9Y6S9 549 aa5.35□□□□□ -1.55
HMG20A-204ENST00000558288 MROH7Q68CQ1 1323 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms