RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 REC8O95072 547 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-219ENST00000556432 HOXA6P31267 233 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 MPLP40238 635 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 NOVA1P51513 510 aaKnown RBP15.26■□□□□ 0.03
ACTN1-219ENST00000556432 EPHA5P54756 1037 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 ACAP1Q15027 740 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 ZNF568Q3ZCX4 644 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 WDR44Q5JSH3 913 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 NT5DC1Q5TFE4 455 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 RNF19BQ6ZMZ0 732 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 ARID3BQ8IVW6 561 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-219ENST00000556432 CEP120Q8N960 986 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 APPL2Q8NEU8 664 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 NACC1Q96RE7 527 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 LSM14BQ9BX40 385 aaKnown RBP15.26■□□□□ 0.03
ACTN1-219ENST00000556432 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 MAFFQ9ULX9 164 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 SLC8A2Q9UPR5 921 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 SPAG17Q6Q759 2223 aa15.26■□□□□ 0.03
ACTN1-219ENST00000556432 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 SPATA31C1P0DKV0 1188 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 HOXB3P14651 431 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-219ENST00000556432 CYP11B2P19099 503 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 RAP1GAPP47736 663 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 EPHB3P54753 998 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 FCHO2Q0JRZ9 810 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 FOXC1Q12948 553 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 PLD1Q13393 1074 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 ARHGAP29Q52LW3 1261 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 STXBP5Q5T5C0 1151 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 TCEAL6Q6IPX3 200 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 CATSPER3Q86XQ3 398 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 SYNPOQ8N3V7 929 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 TCEAL3Q969E4 200 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 C18orf25Q96B23 403 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-219ENST00000556432 PGLYRP2Q96PD5 576 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 POLD4Q9HCU8 107 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 TUFT1Q9NNX1 390 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 ORC3Q9UBD5 711 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-219ENST00000556432 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
ACTN1-219ENST00000556432 FASNP49327 2511 aaKnown RBP15.24■□□□□ 0.03
ACTN1-219ENST00000556432 MED24O75448 989 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
ACTN1-219ENST00000556432 RPL9P32969 192 aaKnown RBP15.24■□□□□ 0.03
ACTN1-219ENST00000556432 GRM5P41594 1212 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 SCRN1Q12765 414 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 CCINQ13939 588 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 MRPL58Q14197 206 aaKnown RBP15.24■□□□□ 0.03
ACTN1-219ENST00000556432 ARHGAP15Q53QZ3 475 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 WASF1Q92558 559 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 SUSD3Q96L08 255 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 TCHPQ9BT92 498 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 EDEM2Q9BV94 578 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 CDT1Q9H211 546 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 VPS45Q9NRW7 570 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 PDRG1Q9NUG6 133 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 TNFSF13BQ9Y275 285 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 PCDHGA5Q9Y5G8 931 aa15.24■□□□□ 0.03
ACTN1-219ENST00000556432 CCDC169A6NNP5 214 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 K7ERI5 159 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 ALDH1A3P47895 512 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 FOSBP53539 338 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 TNK2Q07912 1038 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 ZNF252P-AS1Q0IIN9 211 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 GPR158Q5T848 1215 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 ERMNQ8TAM6 284 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 DDX12PQ92771 950 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
ACTN1-219ENST00000556432 ACAP3Q96P50 834 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 ATXN3LQ9H3M9 355 aa15.23■□□□□ 0.03
ACTN1-219ENST00000556432 DAXXQ9UER7 740 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-219ENST00000556432 ZZEF1O43149 2961 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 GIPC1O14908 333 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 ATG13O75143 517 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 SPINK2P20155 84 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 MCM7P33993 719 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 PLCB2Q00722 1185 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 YWHAHQ04917 246 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-219ENST00000556432 GRSF1Q12849 480 aaKnown RBP eCLIP15.22■□□□□ 0.03
ACTN1-219ENST00000556432 DUSP4Q13115 394 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 ELF2Q15723 593 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 ITPRIPL2Q3MIP1 535 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 PLA2G2CQ5R387 149 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 PKN3Q6P5Z2 889 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 ALKAL1Q6UXT8 129 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 USP37Q86T82 979 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 TMC8Q8IU68 726 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 KIFAP3Q92845 792 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 LRRC3BQ96PB8 259 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 TMEM209Q96SK2 561 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 MRPL4Q9BYD3 311 aaKnown RBP15.22■□□□□ 0.03
ACTN1-219ENST00000556432 THG1LQ9NWX6 298 aaKnown RBP15.22■□□□□ 0.03
ACTN1-219ENST00000556432 PCDHB8Q9UN66 801 aa15.22■□□□□ 0.03
ACTN1-219ENST00000556432 TIMM13Q9Y5L4 95 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-219ENST00000556432 C4orf47A7E2U8 309 aa15.21■□□□□ 0.03
ACTN1-219ENST00000556432 WNT7AO00755 349 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms