RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 RCBTB1Q8NDN9 531 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 CTCFLQ8NI51 663 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 BTN2A2Q8WVV5 523 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 FERMT2Q96AC1 680 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 DHX58Q96C10 678 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 SGSM3Q96HU1 749 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 PANX2Q96RD6 677 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 STRBPQ96SI9 672 aaKnown RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 MAP3K14Q99558 947 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 YIPF4Q9BSR8 244 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 MYL10Q9BUA6 226 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 CARD6Q9BX69 1037 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TSPYL1Q9H0U9 437 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 ARMT1Q9H993 441 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 ARFGAP3Q9NP61 516 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 GPR27Q9NS67 375 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 FANCLQ9NW38 375 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 KIAA1522Q9P206 1035 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 MAGEC2Q9UBF1 373 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 INVSQ9Y283 1065 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 RIPOR2Q9Y4F9 1068 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 KIAA0100Q14667 2235 aaKnown RBP4.9□□□□□ -1.63
ATXN3-241ENST00000556374 A0A1B0GUL6 1792 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TNKSO95271 1327 aa4.9□□□□□ -1.63
ATXN3-241ENST00000556374 TCRBV5S2A0A599 114 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 CTAGE9A4FU28 777 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 FOXP2O15409 715 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 RANBP6O60518 1105 aaKnown RBP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 DDAH1O94760 285 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 ATP1A3P13637 1013 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF20P17024 532 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 ATP2B1P20020 1258 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 CALML3P27482 149 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 KIF5BP33176 963 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 IL6STP40189 918 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 EPHB4P54760 987 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 CKAP4Q07065 602 aaKnown RBP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 PPARAQ07869 468 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 PUM1Q14671 1186 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 BRD3Q15059 726 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 TERF2Q15554 542 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 ERCC6LQ2NKX8 1250 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 LONRF3Q496Y0 759 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 MAP9Q49MG5 647 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 HSP90B2PQ58FF3 399 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 CAVIN4Q5BKX8 364 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 SOGA3Q5TF21 947 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 SPATA1Q5VX52 437 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 KLHL10Q6JEL2 608 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 CCDC70Q6NSX1 233 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 TMED8Q6PL24 325 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 C6orf15Q6UXA7 325 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 LEKR1Q6ZMV7 388 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 PPIL6Q8IXY8 311 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 KLHL36Q8N4N3 616 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 IGSF22Q8N9C0 903 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 CHST13Q8NET6 341 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 CCDC148Q8NFR7 591 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 IGDCC4Q8TDY8 1250 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 KCTD13Q8WZ19 329 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 RABGGTAQ92696 567 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 PPP1R14AQ96A00 147 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 C1orf159Q96HA4 380 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 AIFM3Q96NN9 605 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 GSDMAQ96QA5 445 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 ZFYVE21Q9BQ24 234 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 TMEM168Q9H0V1 697 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 GJB4Q9NTQ9 266 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 AATFQ9NY61 560 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 FBXO2Q9UK22 296 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 PCDHB4Q9Y5E5 795 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 SRPRBQ9Y5M8 271 aaKnown RBP4.89□□□□□ -1.63
ATXN3-241ENST00000556374 MRFAP1Q9Y605 127 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 ITIH6Q6UXX5 1313 aa4.89□□□□□ -1.63
ATXN3-241ENST00000556374 TCRBV5S4A2TA0A5A2 114 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 ERICH4A6NGS2 130 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 BTBD18B2RXH4 712 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 TMEM232C9JQI7 657 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 ARNTLO00327 626 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 PES1O00541 588 aaKnown RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 DDX3XO00571 662 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 SMAD7O15105 426 aaKnown RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 CELF2O95319 508 aaKnown RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 SERPINB2P05120 415 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 PNMA6AP0CW24 399 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 FPR2P25090 351 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 PPP1R2P41236 205 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 TRAPPC10P48553 1259 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 NLRP5P59047 1200 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 PAK1Q13153 545 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 RASGRF1Q13972 1273 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 MORC3Q14149 939 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 KARSQ15046 597 aaKnown RBP4.88□□□□□ -1.63
ATXN3-241ENST00000556374 WHAMMP3Q1A5X7 153 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 CCDC93Q567U6 631 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 TTC38Q5R3I4 469 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 MCTP2Q6DN12 878 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 TEPPQ6URK8 271 aa4.88□□□□□ -1.63
ATXN3-241ENST00000556374 DPH6Q7L8W6 267 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms