RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PRR33A8MZF0 331 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 C2CD4DB7Z1M9 353 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 TISP43B9A030 160 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 ANKRD63C9JTQ0 380 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 GOLGA6L19H0YKK7 550 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 I3L4J1 428 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 SYN3O14994 580 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 ADAM12O43184 909 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 RFPL2O75678 378 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
ACTN1-215ENST00000555616 CYP3A5P20815 502 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 LRPAP1P30533 357 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 AARSP49588 968 aaKnown RBP eCLIP10.43□□□□□ -0.74
ACTN1-215ENST00000555616 MRE11P49959 708 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 CASP5P51878 434 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 POU5F1Q01860 360 aaKnown RBP10.43□□□□□ -0.74
ACTN1-215ENST00000555616 MYL5Q02045 173 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 RAB33AQ14088 237 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 PTPN21Q16825 1174 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 BMT2Q1RMZ1 405 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 SLFN12LQ6IEE8 588 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 SLC8B1Q6J4K2 584 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 CCDC149Q6ZUS6 474 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 ANKS3Q6ZW76 656 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 EPM2AIP1Q7L775 607 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-215ENST00000555616 PALB2Q86YC2 1186 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 CD302Q8IX05 232 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 TDRD5Q8NAT2 981 aaKnown RBP10.43□□□□□ -0.74
ACTN1-215ENST00000555616 KREMEN2Q8NCW0 462 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 GOLGA5Q8TBA6 731 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 SCFD1Q8WVM8 642 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 NELFBQ8WX92 580 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 FAM122AQ96E09 287 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 SUSD3Q96L08 255 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 TSG101Q99816 390 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 LRFN3Q9BTN0 628 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 FGFBP2Q9BYJ0 223 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 IKZF4Q9H2S9 585 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 TMEM206Q9H813 350 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 RPF1Q9H9Y2 349 aaKnown RBP10.43□□□□□ -0.74
ACTN1-215ENST00000555616 UBQLN1Q9UMX0 589 aaKnown RBP10.43□□□□□ -0.74
ACTN1-215ENST00000555616 EXOC7Q9UPT5 735 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 CTNND2Q9UQB3 1225 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 PDCD11Q14690 1871 aaKnown RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 TRIOO75962 3097 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 CLUHO75153 1309 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 LACTBL1A8MY62 500 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 IKBKBO14920 756 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 XPOTO43592 962 aaKnown RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 ZMYND10O75800 440 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 POU2F2P09086 479 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 HNRNPA1P09651 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 SPATA31D3P0C874 917 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 MYBP10242 640 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 SP100P23497 879 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 CCNE1P24864 410 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 ADSSP30520 456 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 HOXA9P31269 272 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 LRRC63Q05C16 580 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 SPAG1Q07617 926 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 KCNA1Q09470 495 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 TPD52L1Q16890 204 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 KNOP1Q1ED39 458 aaKnown RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 LIN9Q5TKA1 542 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 FOXR2Q6PJQ5 311 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 RSPO2Q6UXX9 243 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 SPATA31D4Q6ZUB0 917 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 HS2ST1Q7LGA3 356 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 GLYCTKQ8IVS8 523 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 ZDHHC14Q8IZN3 488 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 SYCP3Q8IZU3 236 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 AOPEPQ8N6M6 819 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 RNF214Q8ND24 703 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 GLIS3Q8NEA6 775 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 ZNF507Q8TCN5 953 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 EDAQ92838 391 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 ACCSQ96QU6 501 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 ASB7Q9H672 318 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 CBX8Q9HC52 389 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 WDR6Q9NNW5 1121 aaKnown RBP10.42□□□□□ -0.74
ACTN1-215ENST00000555616 DERAQ9Y315 318 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 HCN4Q9Y3Q4 1203 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 NUB1Q9Y5A7 615 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 VWA8A3KMH1 1905 aa10.42□□□□□ -0.74
ACTN1-215ENST00000555616 CCDC195A0A1B0GUA6 201 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 M0QZQ0 153 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 PDXKO00764 312 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 CALUO43852 315 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-215ENST00000555616 TBC1D4O60343 1298 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 PRPF6O94906 941 aaKnown RBP10.41□□□□□ -0.74
ACTN1-215ENST00000555616 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
ACTN1-215ENST00000555616 C8AP07357 584 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 NFICP08651 508 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 OR1D2P34982 312 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 ACOT2P49753 483 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 SNRPFP62306 86 aaKnown RBP10.41□□□□□ -0.74
ACTN1-215ENST00000555616 ZXDAP98168 799 aa10.41□□□□□ -0.74
ACTN1-215ENST00000555616 MRPL58Q14197 206 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms