RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 NAP1L3Q99457 506 aaPredicted RBP11.95□□□□□ -0.5
SRP54-205ENST00000554803 PLIN2Q99541 437 aa11.95□□□□□ -0.5
SRP54-205ENST00000554803 FAM129AQ9BZQ8 928 aa11.95□□□□□ -0.5
SRP54-205ENST00000554803 ISCUQ9H1K1 167 aa11.95□□□□□ -0.5
SRP54-205ENST00000554803 SMOC2Q9H3U7 446 aa11.95□□□□□ -0.5
SRP54-205ENST00000554803 TUT1Q9H6E5 874 aaKnown RBP11.95□□□□□ -0.5
SRP54-205ENST00000554803 PKD2L1Q9P0L9 805 aa11.95□□□□□ -0.5
SRP54-205ENST00000554803 TMEM59LQ9UK28 342 aa11.95□□□□□ -0.5
SRP54-205ENST00000554803 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
SRP54-205ENST00000554803 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
SRP54-205ENST00000554803 MYH9P35579 1960 aaKnown RBP11.94□□□□□ -0.5
SRP54-205ENST00000554803 POTEMA6NI47 508 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 C2CD4DB7Z1M9 353 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 ZNF185O15231 689 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 KIAA0754O94854 1291 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 GGPS1O95749 300 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 SRGAP2BP0DMP2 458 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 MYBP10242 640 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 GHRP10912 638 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 GNAT1P11488 350 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 KCNMA1Q12791 1236 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 RPS6KA1Q15418 735 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 ST3GAL2Q16842 350 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 XRRA1Q6P2D8 792 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 SYCE2Q6PIF2 218 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 NIPA1Q7RTP0 329 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 MAATS1Q7Z4T9 603 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 SLC5A5Q92911 643 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 TACO1Q9BSH4 297 aaKnown RBP11.94□□□□□ -0.5
SRP54-205ENST00000554803 MKNK1Q9BUB5 465 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 LSM14BQ9BX40 385 aaKnown RBP11.94□□□□□ -0.5
SRP54-205ENST00000554803 MLXIPQ9HAP2 919 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 AGO4Q9HCK5 861 aaKnown RBP11.94□□□□□ -0.5
SRP54-205ENST00000554803 SEL1LQ9UBV2 794 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 DUSP10Q9Y6W6 482 aa11.94□□□□□ -0.5
SRP54-205ENST00000554803 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 PGRMC1O00264 195 aaKnown RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
SRP54-205ENST00000554803 ATP9AO75110 1047 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 NOL4O94818 638 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 ERLIN2O94905 339 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 HEXIM1O94992 359 aaKnown RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 CHRNA1P02708 482 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 AFPP02771 609 aaKnown RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 LGALS2P05162 132 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 PLA2G4BP0C869 781 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 MYBL2P10244 700 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 FERP16591 822 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 NAP1L1P55209 391 aaKnown RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 EIF3BP55884 814 aaKnown RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 ADAM17P78536 824 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 SETQ01105 290 aaPredicted RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 SPIRE1Q08AE8 756 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 MGAT3Q09327 533 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 ITGB3BPQ13352 177 aaPredicted RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 MTMR1Q13613 665 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 LPIN1Q14693 890 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 DTWD2Q8NBA8 298 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 FLCNQ8NFG4 579 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 CCDC26Q8TAB7 109 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 MICAL1Q8TDZ2 1067 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 RTP3Q9BQQ7 232 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 GANQ9H2C0 597 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 KCTD10Q9H3F6 313 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 BCAS3Q9H6U6 928 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 KCNH7Q9NS40 1196 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 SETD4Q9NVD3 440 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 KCND2Q9NZV8 630 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 SUCLA2Q9P2R7 463 aaPredicted RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 ARMCX3Q9UH62 379 aaPredicted RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 DMGDHQ9UI17 866 aaKnown RBP11.93□□□□□ -0.5
SRP54-205ENST00000554803 VAV3Q9UKW4 847 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 PCDHA2Q9Y5H9 948 aa11.93□□□□□ -0.5
SRP54-205ENST00000554803 DDX39AO00148 427 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 IPO5O00410 1097 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 PI15O43692 258 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 SORBS3O60504 671 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 PALMO75781 387 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 PSMD10O75832 226 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 PLEKP08567 350 aaPredicted RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 HOXB8P17481 243 aaPredicted RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 RPA1P27694 616 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 ERVFC1P60507 584 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 POLR2FP61218 127 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 SP2Q02086 613 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 GFPT1Q06210 699 aaPredicted RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 ADAM9Q13443 819 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 MYBPC2Q14324 1141 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 KNOP1Q1ED39 458 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 RSPO4Q2I0M5 234 aaPredicted RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 AGBL2Q5U5Z8 902 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 LRCH2Q5VUJ6 765 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 PDE12Q6L8Q7 609 aaKnown RBP11.92□□□□□ -0.5
SRP54-205ENST00000554803 DYMQ7RTS9 669 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 NPAS4Q8IUM7 802 aa11.92□□□□□ -0.5
SRP54-205ENST00000554803 BCAS4Q8TDM0 211 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms