RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CTNND1O60716 968 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 DTNBO60941 627 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 NCR1O76036 304 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ENDOD1O94919 500 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ITGB1P05556 798 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ECHS1P30084 290 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PTGS2P35354 604 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PER3P56645 1201 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 WNT3AP56704 352 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 APBA1Q02410 837 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 IL10RAQ13651 578 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ZNF267Q14586 743 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 SEPT2Q15019 361 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 C3orf36Q3SXR2 165 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ARHGAP29Q52LW3 1261 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ATAT1Q5SQI0 421 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 MEX3CQ5U5Q3 659 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PPP4R3AQ6IN85 833 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GGT6Q6P531 493 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 B3GNT9Q6UX72 402 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 LRRC55Q6ZSA7 311 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 Q6ZVL8 140 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 FAM83AQ86UY5 434 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GRAMD1CQ8IYS0 662 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 BEND2Q8NDZ0 799 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 OR2I1PQ8NGU4 316 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.94□□□□□ -2.16e-6■■■■■ 27.5
PRPF39-208ENST00000554785 MDM1Q8TC05 714 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PROKR1Q8TCW9 393 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ZNF480Q8WV37 535 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 LENG9Q96B70 501 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 RUNDC1Q96C34 613 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 MVB12AQ96EY5 273 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PDCD2LQ9BRP1 358 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 NDC1Q9BTX1 674 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PCGF6Q9BYE7 350 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 SLC12A5Q9H2X9 1139 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 OBP2AQ9NY56 170 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GPRC5DQ9NZD1 345 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 EIF2B4Q9UI10 523 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PCDHA13Q9Y5I0 950 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 CFAP20Q9Y6A4 193 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PLCH2O75038 1416 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PNPLA7Q6ZV29 1317 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 IQSEC2Q5JU85 1478 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 NRP1O14786 923 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PHLPP1O60346 1717 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PPFIA4O75335 1185 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GASTP01350 101 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 RPLP2P05387 115 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GNALP38405 381 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 FXR1P51114 621 aaKnown RBP eCLIP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 TBX4P57082 545 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 RNASE9P60153 205 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 KRTAP10-6P60371 365 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 NHLH2Q02577 135 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 HLTFQ14527 1009 aaKnown RBP eCLIP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 MST1LQ2TV78 715 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PGS1Q32NB8 556 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PDCD4Q53EL6 469 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PRAMEF14Q5SWL7 426 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 DOK3Q7L591 496 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GDF7Q7Z4P5 450 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 RHOT1Q8IXI2 618 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PQLC1Q8N2U9 271 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 DIS3LQ8TF46 1054 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 HOXB13Q92826 284 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 KAT5Q92993 513 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 C1GALT1C1Q96EU7 318 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 NEURL4Q96JN8 1562 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 TAAR9Q96RI9 348 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 UHRF1Q96T88 793 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ADAM2Q99965 735 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 MANSC1Q9H8J5 431 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 BCO1Q9HAY6 547 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 SPON1Q9HCB6 807 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 PRDM11Q9NQV5 511 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 C1orf112Q9NSG2 853 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 TRPM5Q9NZQ8 1165 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ANKFY1Q9P2R3 1169 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 GABBR1Q9UBS5 961 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 DKK2Q9UBU2 259 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 MAP3K2Q9Y2U5 619 aa1.94□□□□□ -2.1
PRPF39-208ENST00000554785 XIRP1Q702N8 1843 aaKnown RBP1.94□□□□□ -2.1
PRPF39-208ENST00000554785 ATP10AO60312 1499 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 NUP153P49790 1475 aaKnown RBP1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TRAPPC8Q9Y2L5 1435 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CCDC78A2IDD5 438 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 UNC119BA6NIH7 251 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 TBKBP1A7MCY6 615 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SGTAO43765 313 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CAND2O75155 1236 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ABHD16AO95870 558 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 GCP02774 474 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 GYPEP15421 78 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 BMP5P22003 454 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 CRHR1P34998 444 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 ADRA1BP35368 520 aa1.93□□□□□ -2.1
PRPF39-208ENST00000554785 SREBF1P36956 1147 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms