RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 DPH6Q7L8W6 267 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 TMEM192Q8IY95 271 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 COLGALT2Q8IYK4 626 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 SMYD4Q8IYR2 804 aaPredicted RBP7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 LRRC52Q8N7C0 313 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 GLIS3Q8NEA6 775 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 GSTCDQ8NEC7 633 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 APPL2Q8NEU8 664 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 ERCC4Q92889 916 aaPredicted RBP7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 LPPQ93052 612 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 SAAL1Q96ER3 474 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 CGRRF1Q99675 332 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 SRRTQ9BXP5 876 aaKnown RBP7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 NGRNQ9NPE2 291 aaKnown RBP7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.89□□□□□ -1.156e-6■□□□□ 8.3
HNRNPC-210ENST00000554417 INTS13Q9NVM9 706 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 DPP3Q9NY33 737 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 CTNND2Q9UQB3 1225 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 DAAM1Q9Y4D1 1078 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 NUB1Q9Y5A7 615 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 TTC3P53804 2025 aa7.89□□□□□ -1.15
HNRNPC-210ENST00000554417 SF3B1O75533 1304 aaKnown RBP eCLIP7.88□□□□□ -1.155e-6■■■■■ 39
HNRNPC-210ENST00000554417 SIP14410 1827 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 LINC01553A4QN01 128 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 GOLGA6L19H0YKK7 550 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 H3BNC9 293 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 PTGESO14684 152 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 NRP1O14786 923 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 SYN3O14994 580 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 ZC3H11AO75152 810 aaKnown RBP eCLIP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 PHACTR2O75167 634 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 AKAP3O75969 853 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 B3GAT3O94766 335 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 KIF4AO95239 1232 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 TPM3P06753 285 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 CA3P07451 260 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 DLATP10515 647 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 CDK11BP21127 795 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 IBSPP21815 317 aaPredicted RBP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 TNFSF9P41273 254 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 OR1G1P47890 313 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 BCAR1P56945 870 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 TFAMQ00059 246 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 TAP1Q03518 808 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 UPP1Q16831 310 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 USP41Q3LFD5 358 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 FILIP1LQ4L180 1135 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 HABP4Q5JVS0 413 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 JADE1Q6IE81 842 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 DDX53Q86TM3 631 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 METTL23Q86XA0 190 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 CBWD2Q8IUF1 395 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 CEP120Q8N960 986 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 COLGALT1Q8NBJ5 622 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 CCDC127Q96BQ5 260 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 IGSF21Q96ID5 467 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 ZFP42Q96MM3 310 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 HAPLN2Q9GZV7 340 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 ZNF576Q9H609 170 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 CWH43Q9H720 699 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 NRDE2Q9H7Z3 1164 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 TMEM8AQ9HCN3 771 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 RNF19AQ9NV58 838 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 KLK14Q9P0G3 267 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 ADAM28Q9UKQ2 775 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 MAFFQ9ULX9 164 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 USP20Q9Y2K6 914 aa7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 MRPL42Q9Y6G3 142 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-210ENST00000554417 MICAL3Q7RTP6 2002 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 ANO9A1A5B4 782 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 SYCE3A1L190 88 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 GTPBP10A4D1E9 387 aaKnown RBP7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 GOLGA8IPA6NC78 632 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 GOLGA8JA6NMD2 632 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 TISP43B9A030 160 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 H7C4K7 107 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 PODXLO00592 558 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 PIRO00625 290 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 SIAH2O43255 324 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 FGF18O76093 207 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 POU3F3P20264 500 aaPredicted RBP7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 CTNNB1P35222 781 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 TAF6P49848 677 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 ZNF445P59923 1031 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 SMARCB1Q12824 385 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 BIRC3Q13489 604 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 PAN2Q504Q3 1202 aaKnown RBP7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 EPC2Q52LR7 807 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 WDR44Q5JSH3 913 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 TCERG1LQ5VWI1 586 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 KIAA1841Q6NSI8 718 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 LRSAM1Q6UWE0 723 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 LRRC55Q6ZSA7 311 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 ANKS3Q6ZW76 656 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 RTL10Q7L3V2 364 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 PPFIBP1Q86W92 1011 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 FMNL3Q8IVF7 1028 aa7.87□□□□□ -1.15
HNRNPC-210ENST00000554417 SLC39A11Q8N1S5 342 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms