RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CDT1Q9H211 546 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 C17orf75Q9HAS0 396 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ASAH2Q9NR71 780 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 GMEB2Q9UKD1 530 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 NDRG2Q9UN36 371 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 PCDHGA2Q9Y5H1 932 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 E9PMD0 336 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 H3BQV1 296 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 SLC16A4O15374 487 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 CLDN3O15551 220 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 LRRN2O75325 713 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 KRT18P05783 430 aaKnown RBP9.49□□□□□ -0.89
TMEM116-217ENST00000552801 MYL4P12829 197 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 ATF2P15336 505 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 CD72P21854 359 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 NRLP54845 237 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 ADCY1Q08828 1119 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 NOLC1Q14978 699 aaKnown RBP eCLIP9.49□□□□□ -0.89
TMEM116-217ENST00000552801 NAB2Q15742 525 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 TPGS2Q68CL5 300 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 DNASE1L2Q92874 299 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 ELSPBP1Q96BH3 223 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 ZSCAN32Q9NX65 697 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 CHMP5Q9NZZ3 219 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 INSL5Q9Y5Q6 135 aa9.49□□□□□ -0.89
TMEM116-217ENST00000552801 RIF1Q5UIP0 2472 aaKnown RBP9.48□□□□□ -0.89
TMEM116-217ENST00000552801 ARHGEF37A1IGU5 675 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 ZNF263O14978 683 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 TOM1L1O75674 476 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 KCNE1P15382 129 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 CEBPBP17676 345 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 GDI1P31150 447 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 ALDH1A3P47895 512 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 EPHB3P54753 998 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 YWHAHQ04917 246 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-217ENST00000552801 PPP2R3AQ06190 1150 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 RAD51AP2Q09MP3 1159 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 TWF1Q12792 350 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 GRM2Q14416 872 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 TAF12Q16514 161 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 KYAT1Q16773 422 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 SLC8B1Q6J4K2 584 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 ARMCX5Q6P1M9 558 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 DSTYKQ6XUX3 929 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 TCEAL8Q8IYN2 117 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 CEP120Q8N960 986 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 OXCT2Q9BYC2 517 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-217ENST00000552801 GPR88Q9GZN0 384 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 CXCL16Q9H2A7 254 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 AVENQ9NQS1 362 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-217ENST00000552801 HEBP1Q9NRV9 189 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 DLGAP2Q9P1A6 1054 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 LARSQ9P2J5 1176 aaKnown RBP9.48□□□□□ -0.89
TMEM116-217ENST00000552801 FBXL5Q9UKA1 691 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
TMEM116-217ENST00000552801 MAFFQ9ULX9 164 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 USP18Q9UMW8 372 aa9.48□□□□□ -0.89
TMEM116-217ENST00000552801 USP34Q70CQ2 3546 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 WDR27A2RRH5 827 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 SFI1A8K8P3 1242 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 EDN1P05305 212 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 PSMC3P17980 439 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 TARSP26639 723 aaKnown RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 PRPHP41219 470 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 RPS9P46781 194 aaKnown RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 LIG4P49917 911 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 KPNA1P52294 538 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 ECM1Q16610 540 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 ARHGAP15Q53QZ3 475 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 TANGO2Q6ICL3 276 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 RINT1Q6NUQ1 792 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 HAUS6Q7Z4H7 955 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 IGSF22Q8N9C0 903 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 C3orf58Q8NDZ4 430 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 DEPDC1BQ8WUY9 529 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 FAM3CQ92520 227 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 SMARCD2Q92925 531 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 E2F7Q96AV8 911 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 C18orf25Q96B23 403 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 RMDN1Q96DB5 314 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 CALML4Q96GE6 196 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 SUSD3Q96L08 255 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 GCNAQ96QF7 691 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 IER2Q9BTL4 223 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 DDX23Q9BUQ8 820 aaKnown RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 RUSC1Q9BVN2 902 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 FAM126AQ9BYI3 521 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 ZHX3Q9H4I2 956 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 CNTN3Q9P232 1028 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 ARHGAP28Q9P2N2 729 aa9.47□□□□□ -0.89
TMEM116-217ENST00000552801 AFF4Q9UHB7 1163 aaKnown RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 SMG5Q9UPR3 1016 aaKnown RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 MTF2Q9Y483 593 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-217ENST00000552801 HNRNPDLO14979 420 aaKnown RBP9.46□□□□□ -0.9
TMEM116-217ENST00000552801 TBC1D4O60343 1298 aa9.46□□□□□ -0.9
TMEM116-217ENST00000552801 MICAL2O94851 1124 aa9.46□□□□□ -0.9
TMEM116-217ENST00000552801 ABLIM3O94929 683 aa9.46□□□□□ -0.9
TMEM116-217ENST00000552801 CLTAP09496 248 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms