RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 EXTL3O43909 919 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 GPR37L1O60883 481 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 ABLIM3O94929 683 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 ALADP13716 330 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 CYP2J2P51589 502 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 ZXDAP98168 799 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 TFAMQ00059 246 aaKnown RBP10.59□□□□□ -0.71
HDAC7-229ENST00000549883 ALCAMQ13740 583 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 KMT5BQ4FZB7 885 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 PPM1LQ5SGD2 360 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 PDXDC1Q6P996 788 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 DSTYKQ6XUX3 929 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 RNF19BQ6ZMZ0 732 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 CD302Q8IX05 232 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 CEP57L1Q8IYX8 460 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 GPD1LQ8N335 351 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 C1orf127Q8N9H9 656 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 OR5B17Q8NGF7 314 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 EDAQ92838 391 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 PGLYRP2Q96PD5 576 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 RTP3Q9BQQ7 232 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 C1QTNF1Q9BXJ1 281 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 GZF1Q9H116 711 aaPredicted RBP10.59□□□□□ -0.71
HDAC7-229ENST00000549883 TMEM206Q9H813 350 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 MAGEF1Q9HAY2 307 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 AGPAT3Q9NRZ7 376 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 ZDHHC7Q9NXF8 308 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 RBAKQ9NYW8 714 aaPredicted RBP10.59□□□□□ -0.71
HDAC7-229ENST00000549883 DNMT3BQ9UBC3 853 aaKnown RBP10.59□□□□□ -0.71
HDAC7-229ENST00000549883 POLIQ9UNA4 740 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 DERAQ9Y315 318 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 C2CD2Q9Y426 696 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 NR2E1Q9Y466 385 aa10.59□□□□□ -0.71
HDAC7-229ENST00000549883 PVALEFA0A1B0GWK0 134 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 EIF3DO15371 548 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDAC7-229ENST00000549883 OAZ2O95190 189 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 IL18RAPO95256 599 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 C1RP00736 705 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 PDGFBP01127 241 aaPredicted RBP10.58□□□□□ -0.72
HDAC7-229ENST00000549883 COL9A1P20849 921 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
HDAC7-229ENST00000549883 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
HDAC7-229ENST00000549883 SYKP43405 635 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 PTPN21Q16825 1174 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 LIN9Q5TKA1 542 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 WSCD1Q658N2 575 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 ZNF280DQ6N043 979 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 KRBA2Q6ZNG9 492 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 HFE2Q6ZVN8 426 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 GET4Q7L5D6 327 aaPredicted RBP10.58□□□□□ -0.72
HDAC7-229ENST00000549883 ZDHHC14Q8IZN3 488 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 TTC9BQ8N6N2 239 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 RDH13Q8NBN7 331 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 APPL2Q8NEU8 664 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 OR10T2Q8NGX3 314 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 ZNF461Q8TAF7 563 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 ITFG1Q8TB96 612 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 TSPAN18Q96SJ8 248 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 RPP25Q9BUL9 199 aaKnown RBP10.58□□□□□ -0.72
HDAC7-229ENST00000549883 RHOBTB2Q9BYZ6 727 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 MTMR12Q9C0I1 747 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 SCAND2PQ9GZW5 306 aaPredicted RBP10.58□□□□□ -0.72
HDAC7-229ENST00000549883 HSPBP1Q9NZL4 362 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 SIX4Q9UIU6 781 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 ZNF318Q5VUA4 2279 aa10.58□□□□□ -0.72
HDAC7-229ENST00000549883 COL4A3Q01955 1670 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 A0A1W2PQ27 194 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 A0A1W2PQ64 194 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 A0A1W2PQD8 194 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 H7C4K7 107 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 PRRG1O14668 218 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 XPOTO43592 962 aaKnown RBP10.57□□□□□ -0.72
HDAC7-229ENST00000549883 HCRTO43612 131 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 NARSO43776 548 aaKnown RBP10.57□□□□□ -0.72
HDAC7-229ENST00000549883 SOAT2O75908 522 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ZNF202O95125 648 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ITGB3P05106 788 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 HNRNPA1P09651 372 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDAC7-229ENST00000549883 CPB1P15086 417 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ATF2P15336 505 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 YWHAHQ04917 246 aaPredicted RBP10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ADCY1Q08828 1119 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 CCDC142Q17RM4 750 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 BMT2Q1RMZ1 405 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 SLC5A9Q2M3M2 681 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 OVOS1Q6IE37 1185 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 TRIM67Q6ZTA4 783 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 STXBP4Q6ZWJ1 553 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 OTOP3Q7RTS5 596 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 CSGALNACT2Q8N6G5 542 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 PLEKHO2Q8TD55 490 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ING5Q8WYH8 240 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ERCC4Q92889 916 aaPredicted RBP10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ELMO3Q96BJ8 720 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 ASIC4Q96FT7 647 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 PYM1Q9BRP8 204 aaKnown RBP10.57□□□□□ -0.72
HDAC7-229ENST00000549883 CYP4F11Q9HBI6 524 aa10.57□□□□□ -0.72
HDAC7-229ENST00000549883 CEP72Q9P209 647 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms