RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 RFFLQ8WZ73 363 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 EGFL8Q99944 293 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 VCX3BQ9H321 246 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 DPP7Q9UHL4 492 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 RIC1Q4ADV7 1423 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF142P52746 1687 aaPredicted RBP9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 NCK2O43639 380 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 TBC1D12O60347 775 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 FOSL2P15408 326 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 FGFR4P22455 802 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 HADHAP40939 763 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 CAV1Q03135 178 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 SZRD1Q7Z422 152 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 MRPS31Q92665 395 aaKnown RBP9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 CAPS2Q9BXY5 557 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC15A5A6NIM6 579 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 CABYRO75952 493 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 SYF2O95926 243 aaKnown RBP9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 NPTX2P47972 431 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC11A2P49281 568 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 CDH18Q13634 790 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 BTG3Q14201 252 aaPredicted RBP9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 SEC23AQ15436 765 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 KIF19Q2TAC6 998 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 KCTD16Q68DU8 428 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 GLTPD2A6NH11 291 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 GHRP10912 638 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 MYL4P12829 197 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 FDPSP14324 419 aaKnown RBP9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 ARL4DP49703 201 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 MAP3K7CLP57077 242 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 CNTN2Q02246 1040 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 CHSY1Q86X52 802 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 C4orf19Q8IY42 314 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 REPS2Q8NFH8 660 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 RABGGTAQ92696 567 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 YIPF2Q9BWQ6 316 aa9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 XRN1Q8IZH2 1706 aaKnown RBP9.52□□□□□ -0.89
MTHFD1-202ENST00000545908 CCDC188H7C350 402 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ATP9BO43861 1147 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 RCN2Q14257 317 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 RASGRP2Q7LDG7 609 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 HERC6Q8IVU3 1022 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 APBA2Q99767 749 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 MRIQ9BWK5 157 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 LIMA1Q9UHB6 759 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 DBR1Q9UK59 544 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TTC26A0AVF1 554 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ETFBP38117 255 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 LHX1P48742 406 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ORC1Q13415 861 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 CUL2Q13617 745 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 EDRF1Q3B7T1 1238 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 GJC2Q5T442 439 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ANGPTL8Q6UXH0 198 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 REM2Q8IYK8 340 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 FAM71BQ8TC56 605 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 IL25Q9H293 177 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 AGPAT3Q9NRZ7 376 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 IPPQ9Y573 584 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TMCC1O94876 653 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 IL1RL1Q01638 556 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 MAP2K5Q13163 448 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 IKBKEQ14164 716 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 SMAD1Q15797 465 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF280DQ6N043 979 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TMC7Q7Z402 723 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 CARNMT1Q8N4J0 409 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC35G2Q8TBE7 412 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 SNF8Q96H20 258 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 KRT82Q9NSB4 513 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 PACSIN2Q9UNF0 486 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 GAKO14976 1311 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 HABP4Q5JVS0 413 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ATG16L1Q676U5 607 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 CFAP69A5D8W1 941 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TXNDC9O14530 226 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TTC4O95801 387 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 SOX10P56693 466 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 RPL10AP62906 217 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 CCDC15Q0P6D6 951 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 PCSK7Q16549 785 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 MDH1BQ5I0G3 518 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 ZNF677Q86XU0 584 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 BHMTQ93088 406 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 SDCCAG3Q96C92 435 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 HAUS8Q9BT25 410 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 CINPQ9BW66 212 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TRIM54Q9BYV2 358 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC13A4Q9UKG4 626 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 MROH7Q68CQ1 1323 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 P4HA2O15460 535 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 IGFBP4P22692 258 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 AKT1P31749 480 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 IFNAR2P48551 515 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 GRIK5Q16478 980 aa9.51□□□□□ -0.89
MTHFD1-202ENST00000545908 TTC31Q49AM3 519 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms