RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 DEPDC1BQ8WUY9 529 aa24.66■■□□□ 1.54
CDKN3-207ENST00000543789 OXCT2Q9BYC2 517 aaPredicted RBP24.66■■□□□ 1.54
CDKN3-207ENST00000543789 GPR88Q9GZN0 384 aa24.66■■□□□ 1.54
CDKN3-207ENST00000543789 LMAN1LQ9HAT1 526 aa24.66■■□□□ 1.54
CDKN3-207ENST00000543789 TRPV4Q9HBA0 871 aa24.66■■□□□ 1.54
CDKN3-207ENST00000543789 M0QZQ0 153 aa24.65■■□□□ 1.54
CDKN3-207ENST00000543789 OAZ2O95190 189 aa24.65■■□□□ 1.54
CDKN3-207ENST00000543789 MATR3P43243 847 aaKnown RBP eCLIP24.65■■□□□ 1.54
CDKN3-207ENST00000543789 PPP2R5DQ14738 602 aa24.65■■□□□ 1.54
CDKN3-207ENST00000543789 MFSD6LQ8IWD5 586 aa24.65■■□□□ 1.54
CDKN3-207ENST00000543789 SYT2Q8N9I0 419 aaPredicted RBP24.65■■□□□ 1.54
CDKN3-207ENST00000543789 BEST2Q8NFU1 509 aa24.65■■□□□ 1.54
CDKN3-207ENST00000543789 IER2Q9BTL4 223 aa24.65■■□□□ 1.54
CDKN3-207ENST00000543789 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.65■■□□□ 1.54
CDKN3-207ENST00000543789 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.65■■□□□ 1.54
CDKN3-207ENST00000543789 PIAS3Q9Y6X2 628 aa24.65■■□□□ 1.54
CDKN3-207ENST00000543789 CLTAP09496 248 aa24.64■■□□□ 1.54
CDKN3-207ENST00000543789 CXCL8P10145 99 aa24.64■■□□□ 1.54
CDKN3-207ENST00000543789 SPAG1Q07617 926 aa24.64■■□□□ 1.54
CDKN3-207ENST00000543789 TEAD2Q15562 447 aa24.64■■□□□ 1.54
CDKN3-207ENST00000543789 HYIQ5T013 277 aa24.64■■□□□ 1.54
CDKN3-207ENST00000543789 KCTD17Q8N5Z5 321 aa24.64■■□□□ 1.54
CDKN3-207ENST00000543789 E2F7Q96AV8 911 aa24.64■■□□□ 1.54
CDKN3-207ENST00000543789 TIMM13Q9Y5L4 95 aaPredicted RBP24.64■■□□□ 1.54
CDKN3-207ENST00000543789 FANCMQ8IYD8 2048 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 HEPACAM2A8MVW5 462 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 CYP3A5P20815 502 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 LRPAP1P30533 357 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 PLD1Q13393 1074 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 ZBTB6Q15916 424 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 USP37Q86T82 979 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 TMEM130Q8N3G9 435 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 KIF12Q96FN5 646 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 PNMA5Q96PV4 448 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 SLITRK6Q9H5Y7 841 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 KCND2Q9NZV8 630 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 YIPF1Q9Y548 306 aa24.63■■□□□ 1.53
CDKN3-207ENST00000543789 TTC26A0AVF1 554 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 PRR5-ARHGAP8B1AHC4 643 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 H0YCG3 227 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 TDGF1P13385 188 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 CCR3P51677 355 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 SLC12A3P55017 1021 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 ARHGAP8P85298 464 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 LMNB2Q03252 620 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 DUSP4Q13115 394 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 SHKBP1Q8TBC3 707 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 BICD1Q96G01 975 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 PGLYRP2Q96PD5 576 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 PLIN2Q99541 437 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 HAPLN2Q9GZV7 340 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 GMEB2Q9UKD1 530 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 UBQLN1Q9UMX0 589 aaKnown RBP24.62■■□□□ 1.53
CDKN3-207ENST00000543789 MIA3Q5JRA6 1907 aa24.62■■□□□ 1.53
CDKN3-207ENST00000543789 OR6C75A6NL08 312 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 VNN2O95498 520 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 OR4Q2P0C623 313 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 PLA2G4BP0C869 781 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 AARSP49588 968 aaKnown RBP eCLIP24.61■■□□□ 1.53
CDKN3-207ENST00000543789 ATXN1P54253 815 aaKnown RBP24.61■■□□□ 1.53
CDKN3-207ENST00000543789 EPHB3P54753 998 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 MLLT6P55198 1093 aaPredicted RBP24.61■■□□□ 1.53
CDKN3-207ENST00000543789 GPR17Q13304 367 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 DSTYKQ6XUX3 929 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 YAF2Q8IY57 180 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 CELF5Q8N6W0 485 aaKnown RBP24.61■■□□□ 1.53
CDKN3-207ENST00000543789 CSGALNACT1Q8TDX6 532 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 LRRC3Q9BY71 257 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 LARSQ9P2J5 1176 aaKnown RBP24.61■■□□□ 1.53
CDKN3-207ENST00000543789 RAB23Q9ULC3 237 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 USP18Q9UMW8 372 aa24.61■■□□□ 1.53
CDKN3-207ENST00000543789 CEP250Q9BV73 2442 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 ARNTLO00327 626 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 CHRNB1P11230 501 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 TGM1P22735 817 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 CCNE1P24864 410 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 ALDH1A3P47895 512 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 ATP2C1P98194 919 aaPredicted RBP24.6■■□□□ 1.53
CDKN3-207ENST00000543789 PPP2R3AQ06190 1150 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 KYAT1Q16773 422 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 RILPL1Q5EBL4 403 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 MCTP1Q6DN14 999 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 CDK5RAP3Q96JB5 506 aa24.6■■□□□ 1.53
CDKN3-207ENST00000543789 NPHP3-ACAD11A0A0J9YXS1 232 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 A0A1W2PRU2 124 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 LACTBL1A8MY62 500 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 XPOTO43592 962 aaKnown RBP24.59■■□□□ 1.53
CDKN3-207ENST00000543789 TNFSF9P41273 254 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 CXCL12P48061 93 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 C1orf228Q6PIY5 440 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 HAUS6Q7Z4H7 955 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 TMC8Q8IU68 726 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 MSANTD3Q96H12 275 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 TSPAN18Q96SJ8 248 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 DNAJC25Q9H1X3 360 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 CRISPLD1Q9H336 500 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 CDV3Q9UKY7 258 aaKnown RBP24.59■■□□□ 1.53
CDKN3-207ENST00000543789 NCANO14594 1321 aa24.59■■□□□ 1.53
CDKN3-207ENST00000543789 TRIP11Q15643 1979 aa24.58■■□□□ 1.53
CDKN3-207ENST00000543789 CHADO15335 359 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms