RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 LRRC43Q8N309 656 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 SMRP1Q8NCR6 262 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 RABGGTAQ92696 567 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 PGBD4Q96DM1 585 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 CEP63Q96MT8 703 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 CDT1Q9H211 546 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 KCTD10Q9H3F6 313 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 LZTFL1Q9NQ48 299 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 PUF60Q9UHX1 559 aaKnown RBP17.27■□□□□ 0.35
TRIM46-209ENST00000543729 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.35
TRIM46-209ENST00000543729 TGFB1I1O43294 461 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 LDHAP00338 332 aaKnown RBP17.26■□□□□ 0.35
TRIM46-209ENST00000543729 PROZP22891 400 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 ARHGAP25P42331 645 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 MARSP56192 900 aaKnown RBP17.26■□□□□ 0.35
TRIM46-209ENST00000543729 PLCB3Q01970 1234 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 MCL1Q07820 350 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 ZCWPW2Q504Y3 356 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 RSRC2Q7L4I2 434 aaKnown RBP17.26■□□□□ 0.35
TRIM46-209ENST00000543729 RNF169Q8NCN4 708 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 ZBTB45Q96K62 511 aaPredicted RBP17.26■□□□□ 0.35
TRIM46-209ENST00000543729 CASD1Q96PB1 797 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 TRAIPQ9BWF2 469 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 EIF2AQ9BY44 585 aaKnown RBP17.26■□□□□ 0.35
TRIM46-209ENST00000543729 IKZF4Q9H2S9 585 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 PTPRHQ9HD43 1115 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 AGO2Q9UKV8 859 aaKnown RBP17.26■□□□□ 0.35
TRIM46-209ENST00000543729 TRAF3IP3Q9Y228 551 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 PCDHGC5Q9Y5F6 944 aa17.26■□□□□ 0.35
TRIM46-209ENST00000543729 A0A0B4J269 797 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 A0A0U1RQF3 1178 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
TRIM46-209ENST00000543729 TISP43B9A030 160 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
TRIM46-209ENST00000543729 FSCN2O14926 492 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 CLIC2O15247 247 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
TRIM46-209ENST00000543729 GLP2RO95838 553 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 PPM1AP35813 382 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 ERVFC1P60507 584 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 FKBP3Q00688 224 aaKnown RBP17.25■□□□□ 0.35
TRIM46-209ENST00000543729 SLC39A4Q6P5W5 647 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 WDR59Q6PJI9 974 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 LRRC55Q6ZSA7 311 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 GOLGA1Q92805 767 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 ZNF558Q96NG5 402 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
TRIM46-209ENST00000543729 NDST4Q9H3R1 872 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 RNF19AQ9NV58 838 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRIM46-209ENST00000543729 STYXL1Q9Y6J8 313 aa17.25■□□□□ 0.35
TRIM46-209ENST00000543729 V9GYY5 206 aaPredicted RBP17.25■□□□□ 0.35
TRIM46-209ENST00000543729 OGTO15294 1046 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 EOMESO95936 686 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 NR3C1P04150 777 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 SRGAP2BP0DMP2 458 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 ITGA4P13612 1032 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 CYP2J2P51589 502 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 YARSP54577 528 aaKnown RBP17.24■□□□□ 0.35
TRIM46-209ENST00000543729 DUSP6Q16828 381 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 WHAMMP3Q1A5X7 153 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 EDRF1Q3B7T1 1238 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 ZNF569Q5MCW4 686 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 ACRBPQ8NEB7 543 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 NAPGQ99747 312 aaPredicted RBP17.24■□□□□ 0.35
TRIM46-209ENST00000543729 CBWD1Q9BRT8 395 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 APOL6Q9BWW8 343 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 PCIF1Q9H4Z3 704 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 KIAA1586Q9HCI6 787 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
TRIM46-209ENST00000543729 IPPQ9Y573 584 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
TRIM46-209ENST00000543729 PER2O15055 1255 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 EXOC3O60645 756 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 TUBBP07437 444 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 NR2F2P24468 414 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 KRT17Q04695 432 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 RNF135Q8IUD6 432 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 C12orf56Q8IXR9 622 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 ZC3H3Q8IXZ2 948 aaKnown RBP17.24■□□□□ 0.35
TRIM46-209ENST00000543729 GPD1LQ8N335 351 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 XXYLT1Q8NBI6 393 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 NUCKS1Q9H1E3 243 aaKnown RBP17.24■□□□□ 0.35
TRIM46-209ENST00000543729 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
TRIM46-209ENST00000543729 HSPBP1Q9NZL4 362 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 SIK3Q9Y2K2 1263 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 FRMD4BQ9Y2L6 1034 aa17.24■□□□□ 0.35
TRIM46-209ENST00000543729 CETN3O15182 167 aa17.23■□□□□ 0.35
TRIM46-209ENST00000543729 ZNF623O75123 536 aa17.23■□□□□ 0.35
TRIM46-209ENST00000543729 ADSSP30520 456 aa17.23■□□□□ 0.35
TRIM46-209ENST00000543729 GRM5P41594 1212 aa17.23■□□□□ 0.35
TRIM46-209ENST00000543729 OSTNP61366 133 aa17.23■□□□□ 0.35
TRIM46-209ENST00000543729 MYBPC2Q14324 1141 aa17.23■□□□□ 0.35
TRIM46-209ENST00000543729 BMS1Q14692 1282 aaKnown RBP17.23■□□□□ 0.35
TRIM46-209ENST00000543729 ZNF598Q86UK7 904 aaKnown RBP17.23■□□□□ 0.35
TRIM46-209ENST00000543729 LRRN4CLQ8ND94 238 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms