RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 C1orf186Q6ZWK4 172 aa16.83■□□□□ 0.28
RTN3-211ENST00000542238 MFSD6LQ8IWD5 586 aa16.83■□□□□ 0.28
RTN3-211ENST00000542238 YAF2Q8IY57 180 aa16.83■□□□□ 0.28
RTN3-211ENST00000542238 ZNF687Q8N1G0 1237 aa16.83■□□□□ 0.28
RTN3-211ENST00000542238 CELF5Q8N6W0 485 aaKnown RBP16.83■□□□□ 0.28
RTN3-211ENST00000542238 CSGALNACT1Q8TDX6 532 aa16.83■□□□□ 0.28
RTN3-211ENST00000542238 ZBTB45Q96K62 511 aaPredicted RBP16.83■□□□□ 0.28
RTN3-211ENST00000542238 NTPCRQ9BSD7 190 aaKnown RBP16.83■□□□□ 0.28
RTN3-211ENST00000542238 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.83■□□□□ 0.28
RTN3-211ENST00000542238 SFI1A8K8P3 1242 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 CLDN3O15551 220 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 MOSPD3O75425 235 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 GJA1P17302 382 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 CXCL12P48061 93 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 EPHB3P54753 998 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 MAPK7Q13164 816 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 TEAD2Q15562 447 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 LAIR1Q6GTX8 287 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 C1orf228Q6PIY5 440 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 DTHD1Q6ZMT9 781 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 USP37Q86T82 979 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 SPIRE2Q8WWL2 714 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 ZSCAN31Q96LW9 406 aaPredicted RBP16.82■□□□□ 0.28
RTN3-211ENST00000542238 RTKNQ9BST9 563 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 PLEKHA5Q9HAU0 1116 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 PCDHB6Q9Y5E3 794 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 TPRP12270 2363 aaKnown RBP16.82■□□□□ 0.28
RTN3-211ENST00000542238 RALGAPA1Q6GYQ0 2036 aa16.82■□□□□ 0.28
RTN3-211ENST00000542238 PP2D1A8MPX8 630 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 HEPACAM2A8MVW5 462 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 M0QZQ0 153 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 NRG2O14511 850 aaPredicted RBP16.81■□□□□ 0.28
RTN3-211ENST00000542238 OAZ2O95190 189 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 TDGF1P13385 188 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 PLS3P13797 630 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 CCNE1P24864 410 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 GUCY2CP25092 1073 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 U2AF2P26368 475 aaKnown RBP eCLIP16.81■□□□□ 0.289e-6■□□□□ 9.5
RTN3-211ENST00000542238 CDC25AP30304 524 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 PRPHP41219 470 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 MLLT6P55198 1093 aaPredicted RBP16.81■□□□□ 0.28
RTN3-211ENST00000542238 ZRSR1Q15695 479 aaKnown RBP16.81■□□□□ 0.28
RTN3-211ENST00000542238 SEZ6Q53EL9 994 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 ZPBP2Q6X784 338 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 MSANTD3Q96H12 275 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 YIPF1Q9Y548 306 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 CACNA1BQ00975 2339 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 EPG5Q9HCE0 2579 aa16.81■□□□□ 0.28
RTN3-211ENST00000542238 H0YCG3 227 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 MEFVO15553 781 aaPredicted RBP16.8■□□□□ 0.28
RTN3-211ENST00000542238 CLTAP09496 248 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 CXCL8P10145 99 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 CHRNB1P11230 501 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 LRPAP1P30533 357 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 ALDH1A3P47895 512 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 TOB1P50616 345 aaPredicted RBP16.8■□□□□ 0.28
RTN3-211ENST00000542238 KPNA1P52294 538 aaPredicted RBP16.8■□□□□ 0.28
RTN3-211ENST00000542238 MCL1Q07820 350 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 RAD51AP2Q09MP3 1159 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 SPEM2Q0P670 501 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 LRRC32Q14392 662 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 LPAL2Q16609 132 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 PRR23BQ6ZRT6 265 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 KCNK18Q7Z418 384 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 TMEM161BQ8NDZ6 487 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 BEST2Q8NFU1 509 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 SHKBP1Q8TBC3 707 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 KIF12Q96FN5 646 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 BICD1Q96G01 975 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 PGLYRP2Q96PD5 576 aa16.8■□□□□ 0.28
RTN3-211ENST00000542238 C8orf33Q9H7E9 229 aaPredicted RBP16.8■□□□□ 0.28
RTN3-211ENST00000542238 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
RTN3-211ENST00000542238 UBQLN1Q9UMX0 589 aaKnown RBP16.8■□□□□ 0.28
RTN3-211ENST00000542238 A0A1W2PRU2 124 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 OR6C75A6NL08 312 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 CHADO15335 359 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 XPOTO43592 962 aaKnown RBP16.79■□□□□ 0.28
RTN3-211ENST00000542238 LRP3O75074 770 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 RETP07949 1114 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 MAPTP10636 758 aaKnown RBP16.79■□□□□ 0.28
RTN3-211ENST00000542238 CYP3A5P20815 502 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 TGM1P22735 817 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 SPAG1Q07617 926 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 KYAT1Q16773 422 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 SPEM1Q8N4L4 309 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 FAM200AQ8TCP9 573 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 CNTNAP3BQ96NU0 1288 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 CNTNAP3Q9BZ76 1288 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 PARD6AQ9NPB6 346 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 TIMM13Q9Y5L4 95 aaPredicted RBP16.79■□□□□ 0.28
RTN3-211ENST00000542238 ACACBO00763 2458 aa16.79■□□□□ 0.28
RTN3-211ENST00000542238 TTC26A0AVF1 554 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 DCDC2BA2VCK2 349 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 ARNTLO00327 626 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 DPYSL4O14531 572 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms