RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 TPCN2Q8NHX9 752 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 ARHGEF26Q96DR7 871 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 RNF14Q9UBS8 474 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 IGLV3-22A0A075B6J6 115 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 LACTBL1A8MY62 500 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 KBTBD13C9JR72 458 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 ASAP2O43150 1006 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 CA4P22748 312 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 LIG3P49916 1009 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 SARNPP82979 210 aaKnown RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 IFT88Q13099 833 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 CAPSQ13938 189 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 MGAT5BQ3V5L5 792 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 WDR59Q6PJI9 974 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 PDZD4Q76G19 769 aaPredicted RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 ENOSF1Q7L5Y1 443 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 MIB1Q86YT6 1006 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 MYLK4Q86YV6 388 aaPredicted RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 NETO2Q8NC67 525 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 LPPQ93052 612 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 KLF6Q99612 283 aaPredicted RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 XPNPEP3Q9NQH7 507 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 FAM8A1Q9UBU6 413 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 IP6K2Q9UHH9 426 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 ZNF214Q9UL59 606 aaPredicted RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 CYP3A7-CYP3A51PA0A087WV96 503 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 CCDC188H7C350 402 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 APRTP07741 180 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 CYP3A7P24462 503 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 MAGOHP61326 146 aaKnown RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 PDIA2Q13087 525 aaKnown RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 CELF3Q5SZQ8 465 aaKnown RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 FAM71BQ8TC56 605 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 SREK1Q8WXA9 508 aaKnown RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 GAD1Q99259 594 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 HOMER3Q9NSC5 361 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 DBR1Q9UK59 544 aaKnown RBP10.09□□□□□ -0.79
TTC39C-203ENST00000540918 TELO2Q9Y4R8 837 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 AFG3L2Q9Y4W6 797 aa10.09□□□□□ -0.79
TTC39C-203ENST00000540918 SNED1Q8TER0 1413 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 ROBO3Q96MS0 1386 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 DFFAO00273 331 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 ATP9BO43861 1147 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 MSH2P43246 934 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF200P98182 395 aaPredicted RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SLMAPQ14BN4 828 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 JADE1Q6IE81 842 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 GLB1LQ6UWU2 654 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 PID1Q7Z2X4 250 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 RNF180Q86T96 592 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 NOP9Q86U38 636 aaKnown RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 FAM131BQ86XD5 332 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 PPM1NQ8N819 430 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SLC7A14Q8TBB6 771 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 EXT2Q93063 718 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 OSBPL8Q9BZF1 889 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 C17orf75Q9HAS0 396 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 STRIP2Q9ULQ0 834 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 A0A1W2PQJ5 194 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 FZD9O00144 591 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 PPFIA4O75335 1185 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 PHBP35232 272 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 FLT3LGP49771 235 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 IZUMO3Q5VZ72 239 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 BTBD8Q5XKL5 378 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 PCGF5Q86SE9 256 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SCUBE3Q8IX30 993 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 LRRC15Q8TF66 581 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 RBM41Q96IZ5 413 aaKnown RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 CEP41Q9BYV8 373 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 PIH1D1Q9NWS0 290 aaKnown RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 MAP3K20Q9NYL2 800 aaKnown RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 GGT7Q9UJ14 662 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 MAP1BP46821 2468 aaKnown RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 KCNN4O15554 427 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SPAG7O75391 227 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 CRCPO75575 148 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 NCAM1P13591 858 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 YBX3P16989 372 aaKnown RBP eCLIP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SULT1E1P49888 294 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 EIF3EP60228 445 aaKnown RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 CDR2Q01850 454 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 TBX2Q13207 712 aaPredicted RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 FSCN1Q16658 493 aaKnown RBP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 LGSNQ5TDP6 509 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 EDEM1Q92611 657 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 TNIP3Q96KP6 325 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF560Q96MR9 790 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 GMLQ99445 158 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 KATNAL1Q9BW62 490 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 GOLGA2P5Q9HBQ8 144 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 TRPC7Q9HCX4 862 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SIK3Q9Y2K2 1263 aa10.08□□□□□ -0.8
TTC39C-203ENST00000540918 SOWAHBA6NEL2 793 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 SPDYE5A6NIY4 337 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 RBAK-RBAKDNI3L0D1 243 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms