RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 STBD1O95210 358 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 TTC4O95801 387 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 KRT1P04264 644 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 STX2P32856 288 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 RAP1GAPP47736 663 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 BACE1P56817 501 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 KCNJ2P63252 427 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 TFAMQ00059 246 aaKnown RBP14.5□□□□□ -0.09
BNIP3-202ENST00000540159 CYP1B1Q16678 543 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 ZACNQ401N2 412 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 TAOK1Q7L7X3 1001 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 NIPA1Q7RTP0 329 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 YTHDF3Q7Z739 585 aaKnown RBP14.5□□□□□ -0.09
BNIP3-202ENST00000540159 USP37Q86T82 979 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 ANKRD35Q8N283 1001 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 CEP120Q8N960 986 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 PRCCQ92733 491 aaPredicted RBP14.5□□□□□ -0.09
BNIP3-202ENST00000540159 LBHD1Q9BQE6 289 aaPredicted RBP14.5□□□□□ -0.09
BNIP3-202ENST00000540159 PICK1Q9NRD5 415 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 ATP8B3O60423 1300 aa14.5□□□□□ -0.09
BNIP3-202ENST00000540159 LRRD1A4D1F6 860 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 WDR91A4D1P6 747 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 RASSF9O75901 435 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 MAP3K6O95382 1288 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 KRT19P08727 400 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 MON1BQ7L1V2 547 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 TRAPPC12Q8WVT3 735 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 KLF6Q99612 283 aaPredicted RBP14.49□□□□□ -0.09
BNIP3-202ENST00000540159 ST6GALNAC4Q9H4F1 302 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 VPS37BQ9H9H4 285 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 ZNF214Q9UL59 606 aaPredicted RBP14.49□□□□□ -0.09
BNIP3-202ENST00000540159 NAALADL1Q9UQQ1 740 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 L3MBTL1Q9Y468 752 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 C5orf60A6NFR6 353 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 RASA4BC9J798 803 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 RASA4O43374 803 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 EXTL3O43909 919 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 MTA2O94776 668 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 CD19P15391 556 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 RDXP35241 583 aaKnown RBP14.49□□□□□ -0.09
BNIP3-202ENST00000540159 NOMO3P69849 1222 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 GPS1Q13098 491 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 NCOA4Q13772 614 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 ANGEL2Q5VTE6 544 aaKnown RBP14.49□□□□□ -0.09
BNIP3-202ENST00000540159 MIS18BP1Q6P0N0 1132 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 FAM228AQ86W67 206 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 PARP9Q8IXQ6 854 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 EMC1Q8N766 993 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 TMC2Q8TDI7 906 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 FBXL18Q96ME1 805 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 CYP39A1Q9NYL5 469 aa14.49□□□□□ -0.09
BNIP3-202ENST00000540159 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.49□□□□□ -0.092e-6■■■□□ 14.9
BNIP3-202ENST00000540159 CNOT7Q9UIV1 285 aaKnown RBP14.49□□□□□ -0.09
BNIP3-202ENST00000540159 ZNF646O15015 1829 aaPredicted RBP14.48□□□□□ -0.09
BNIP3-202ENST00000540159 EIF4E1BA6NMX2 242 aaKnown RBP14.48□□□□□ -0.09
BNIP3-202ENST00000540159 GOLGA8RI6L899 631 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 PROSCO94903 275 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 GGPS1O95749 300 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 C4BPAP04003 597 aaKnown RBP14.48□□□□□ -0.09
BNIP3-202ENST00000540159 MYL6P60660 151 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 GCNT1Q02742 428 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 WDR78Q5VTH9 848 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 TRPM8Q7Z2W7 1104 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 AGBL3Q8NEM8 1001 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ATL2Q8NHH9 583 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 TGS1Q96RS0 853 aaKnown RBP14.48□□□□□ -0.09
BNIP3-202ENST00000540159 PAGR1Q9BTK6 254 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ZNF302Q9NR11 478 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ARHGAP28Q9P2N2 729 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 MYH9P35579 1960 aaKnown RBP14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ARSEP51690 589 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 OGDHQ02218 1023 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 SAMD3Q8N6K7 520 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ZNF280CQ8ND82 737 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 MCPH1Q8NEM0 835 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ZNF606Q8WXB4 792 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 SLC7A3Q8WY07 619 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ALG13Q9NP73 1137 aaKnown RBP14.48□□□□□ -0.09
BNIP3-202ENST00000540159 SLCO1B3Q9NPD5 702 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 HOMER3Q9NSC5 361 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 PCSK1NQ9UHG2 260 aa14.48□□□□□ -0.09
BNIP3-202ENST00000540159 ACO1P21399 889 aaKnown RBP14.47□□□□□ -0.09
BNIP3-202ENST00000540159 DNAJC3Q13217 504 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 LIN9Q5TKA1 542 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.47□□□□□ -0.09
BNIP3-202ENST00000540159 RMDN2Q96LZ7 410 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 RUNDC3BQ96NL0 473 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 SGK1O00141 431 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 KRT15P19012 456 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 ITIH2P19823 946 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 CDH8P55286 799 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 EFTUD2Q15029 972 aaKnown RBP eCLIP14.47□□□□□ -0.095e-20■■■■□ 20.2
BNIP3-202ENST00000540159 SNCBQ16143 134 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 SUGP1Q8IWZ8 645 aaKnown RBP14.47□□□□□ -0.09
BNIP3-202ENST00000540159 RHOT1Q8IXI2 618 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 ZBED8Q8IZ13 594 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 CCDC63Q8NA47 563 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 EXOC1LA0A1B0GW35 172 aa14.47□□□□□ -0.09
BNIP3-202ENST00000540159 PTPRAP18433 802 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms