RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TNS1Q9HBL0 1735 aaKnown RBP14.94□□□□□ -0.02
UBE3B-210ENST00000539599 CSDE1O75534 798 aaKnown RBP14.94□□□□□ -0.02
UBE3B-210ENST00000539599 SUPT20HL2P0C7V6 817 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 GTF2H1P32780 548 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 DYNLT1P63172 113 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 PSMD6Q15008 389 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 SMTNL2Q2TAL5 461 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 SUPT20HL1Q3ZLR7 823 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 TMEM63BQ5T3F8 832 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 MFSD7Q6UXD7 560 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 LRRC71Q8N4P6 559 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 MCPH1Q8NEM0 835 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 SPOCK2Q92563 424 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 VTI1AQ96AJ9 217 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 MCEEQ96PE7 176 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 PPP1R16BQ96T49 567 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 PAIP2Q9BPZ3 127 aaKnown RBP14.94□□□□□ -0.02
UBE3B-210ENST00000539599 IVNS1ABPQ9Y6Y0 642 aa14.94□□□□□ -0.02
UBE3B-210ENST00000539599 BRCA2P51587 3418 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 TTC4O95801 387 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 TNFAIP8L3Q5GJ75 292 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 SYCP2LQ5T4T6 812 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 NUGGCQ68CJ6 796 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 FUKQ8N0W3 1084 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 CEP120Q8N960 986 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 MORC4Q8TE76 937 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 ZNF302Q9NR11 478 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.93□□□□□ -0.02
UBE3B-210ENST00000539599 CCT8L1PA6NM43 557 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 SRGAP2CP0DJJ0 459 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 RAP1GAPP47736 663 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 SNRPFP62306 86 aaKnown RBP14.93□□□□□ -0.02
UBE3B-210ENST00000539599 PTP4A2Q12974 167 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 PTK6Q13882 451 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 E2F5Q15329 346 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 TMED2Q15363 201 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 KCNT1Q5JUK3 1230 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 SPDYCQ5MJ68 293 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 MIS18BP1Q6P0N0 1132 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 CYB5D1Q6P9G0 228 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 TEX2Q8IWB9 1127 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 SCYL3Q8IZE3 742 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 ABRAQ8N0Z2 381 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 PCYT2Q99447 389 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 TCHPQ9BT92 498 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 PICK1Q9NRD5 415 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 WHRNQ9P202 907 aa14.93□□□□□ -0.02
UBE3B-210ENST00000539599 RLFQ13129 1914 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 GSTTP1A0A1W2PQM5 241 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 CLTAP09496 248 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 BRAFP15056 766 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 MYL6P60660 151 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 NCOA4Q13772 614 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 CAPSQ13938 189 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 FAM47EQ6ZV65 393 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 ZNF365Q70YC5 407 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 PIGWQ7Z7B1 504 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 TRPM4Q8TD43 1214 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 TRAPPC12Q8WVT3 735 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 PNMA3Q9UL41 463 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 TRIM33Q9UPN9 1127 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 AFG3L2Q9Y4W6 797 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 SRRM3A6NNA2 597 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-210ENST00000539599 OATP04181 439 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 CLUL1Q15846 466 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 XKR3Q5GH77 459 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 TREML2Q5T2D2 321 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 TBC1D1Q86TI0 1168 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-210ENST00000539599 KIF2BQ8N4N8 673 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 ZNF606Q8WXB4 792 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 NAALADL1Q9UQQ1 740 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 NEU2Q9Y3R4 380 aa14.92□□□□□ -0.02
UBE3B-210ENST00000539599 SPDYE16A6NNV3 312 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-210ENST00000539599 SPATA31C2B4DYI2 1134 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 UBOX5O94941 541 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 IFNB1P01574 187 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 TNFAIP1Q13829 316 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 ZNF772Q68DY9 489 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-210ENST00000539599 HIBCHQ6NVY1 386 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-210ENST00000539599 SUGP1Q8IWZ8 645 aaKnown RBP14.91□□□□□ -0.02
UBE3B-210ENST00000539599 ATL2Q8NHH9 583 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 CENPTQ96BT3 561 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 SENP7Q9BQF6 1050 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 TPX2Q9ULW0 747 aaKnown RBP14.91□□□□□ -0.02
UBE3B-210ENST00000539599 PARP14Q460N5 1801 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 POC1B-GALNT4F8VUJ3 575 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 PIK3R2O00459 728 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 GAS8O95995 478 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 KRT1P04264 644 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 ITIH2P19823 946 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 CDR1P51861 262 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 LY6KQ17RY6 165 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 TRMT10CQ7L0Y3 403 aaKnown RBP14.91□□□□□ -0.02
UBE3B-210ENST00000539599 USP37Q86T82 979 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 RHOT1Q8IXI2 618 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 ANKRD35Q8N283 1001 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 TCP11Q8WWU5 503 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 TFAP2BQ92481 460 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 TMEM121Q9BTD3 319 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms