RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 NIF3L1Q9GZT8 377 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 MYBP10242 640 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 PTRHD1Q6GMV3 140 aaKnown RBP17.63■□□□□ 0.41
SCARB1-205ENST00000538291 ABTB1Q969K4 478 aaPredicted RBP17.63■□□□□ 0.41
SCARB1-205ENST00000538291 SPATA16Q9BXB7 569 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 TRABDQ9H4I3 376 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 TMEM8AQ9HCN3 771 aa17.63■□□□□ 0.41
SCARB1-205ENST00000538291 C17orf102A2RUQ5 167 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 ZNF263O14978 683 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 EIF3DO15371 548 aaKnown RBP eCLIP17.62■□□□□ 0.411e-7■□□□□ 8.6
SCARB1-205ENST00000538291 TFRCP02786 760 aaKnown RBP17.62■□□□□ 0.41
SCARB1-205ENST00000538291 CSF1RP07333 972 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 TAF6P49848 677 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 MAPRE1Q15691 268 aaKnown RBP17.62■□□□□ 0.41
SCARB1-205ENST00000538291 FAM129AQ9BZQ8 928 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 NSMCE4AQ9NXX6 385 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 SSU72P8A0A1W2PR75 194 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 NPTXRO95502 500 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 FGFR4P22455 802 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 ALDH7A1P49419 539 aaKnown RBP17.62■□□□□ 0.41
SCARB1-205ENST00000538291 GTF2A2P52657 109 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 ARMC6Q6NXE6 501 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 SPATA4Q8NEY3 305 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 OTULINQ96BN8 352 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 PSD3Q9NYI0 1048 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 MEFVO15553 781 aaPredicted RBP17.62■□□□□ 0.41
SCARB1-205ENST00000538291 ARIH2O95376 493 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 SERPINB4P48594 390 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 C10orf120Q5SQS8 335 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 COLEC11Q9BWP8 271 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 RGS2P41220 211 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 PCSK7Q16549 785 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 DCAF6Q58WW2 860 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 C6orf10Q5SRN2 563 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 SAMD7Q7Z3H4 446 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 SHCBP1Q8NEM2 672 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 GPRASP2Q96D09 838 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 ARHGAP26Q9UNA1 814 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
SCARB1-205ENST00000538291 KRT4P19013 534 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 HSPA9P38646 679 aaKnown RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 JMJD4Q9H9V9 463 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 SMG5Q9UPR3 1016 aaKnown RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 PHF2O75151 1096 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 GRAP2O75791 330 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 TMEM169Q96HH4 297 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 AGBL1Q96MI9 1066 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 GPR63Q9BZJ6 419 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 RSAD1Q9HA92 442 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 ETNK1Q9HBU6 452 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 ADAM21Q9UKJ8 722 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 PRG3Q9Y2Y8 225 aaPredicted RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 FAM32AQ9Y421 112 aaKnown RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 MYMKA6NI61 221 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 MTSS1O43312 755 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 GAS2O43903 313 aaKnown RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 FAM200BP0CF97 657 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 SRGNP10124 158 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 ITIH2P19823 946 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 TDRD10Q5VZ19 366 aaKnown RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 ZNF507Q8TCN5 953 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 KCNH7Q9NS40 1196 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 PAK5Q9P286 719 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 XPO7Q9UIA9 1087 aaKnown RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 NTSR2O95665 410 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 GPD1P21695 349 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 GOLGA7BQ2TAP0 167 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 SYCP2LQ5T4T6 812 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 MARCH10Q8NA82 808 aaPredicted RBP17.61■□□□□ 0.41
SCARB1-205ENST00000538291 ARL8AQ96BM9 186 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 HPDLQ96IR7 371 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 RBM15Q96T37 977 aaKnown RBP eCLIP17.61■□□□□ 0.414e-7■■■□□ 18.2
SCARB1-205ENST00000538291 CCDC78A2IDD5 438 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 PPP3CCP48454 512 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 TMED1Q13445 227 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 FBXO33Q7Z6M2 555 aa17.61■□□□□ 0.41
SCARB1-205ENST00000538291 RPA1P27694 616 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 NLRP11P59045 1033 aaKnown RBP17.6■□□□□ 0.41
SCARB1-205ENST00000538291 DPYDQ12882 1025 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 MKNK1Q9BUB5 465 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 CD274Q9NZQ7 290 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 UBQLN1Q9UMX0 589 aaKnown RBP17.6■□□□□ 0.41
SCARB1-205ENST00000538291 P4HA2O15460 535 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 BLVRAP53004 296 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 HDAC4P56524 1084 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 INPP5AQ14642 412 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 CCDC144BQ3MJ40 725 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 NLRP14Q86W24 1093 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
SCARB1-205ENST00000538291 GYS2P54840 703 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 ZC2HC1CQ53FD0 456 aaPredicted RBP17.6■□□□□ 0.41
SCARB1-205ENST00000538291 SNX31Q8N9S9 440 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 MAP3K14Q99558 947 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 WEE2P0C1S8 567 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 ODC1P11926 461 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 RARS2Q5T160 578 aaKnown RBP17.6■□□□□ 0.41
SCARB1-205ENST00000538291 GPAT2Q6NUI2 795 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 RPAINQ86UA6 219 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms