RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 APPL1Q9UKG1 709 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 ANGPTL2Q9UKU9 493 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 TSC22D4Q9Y3Q8 395 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 NEU2Q9Y3R4 380 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 TELO2Q9Y4R8 837 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 ATAD5Q96QE3 1844 aa11.29□□□□□ -0.6
RTN3-208ENST00000537981 E9PBE3 544 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 THAP12O43422 761 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 RARBP10826 455 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 MUTP22033 750 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 TLR1Q15399 786 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 ALX1Q15699 326 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 ILDR2Q71H61 639 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 PATL1Q86TB9 770 aaKnown RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 TRIM59Q8IWR1 403 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 CCDC65Q8IXS2 484 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 ARHGAP24Q8N264 748 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 BBS5Q8N3I7 341 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 POU5F2Q8N7G0 328 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 RBM15BQ8NDT2 890 aaKnown RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 ZNF75CPQ92670 426 aaPredicted RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 CCDC127Q96BQ5 260 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 GCNAQ96QF7 691 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 EURLQ9NYK6 297 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 TMED5Q9Y3A6 229 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 FAM32AQ9Y421 112 aaKnown RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 UQCRBP14927 111 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 TRAPPC10P48553 1259 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 NR1H3Q13133 447 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 GRB10Q13322 594 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 HNRNPDQ14103 355 aaKnown RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 PDK4Q16654 411 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 NT5DC4Q86YG4 428 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 NUP93Q8N1F7 819 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
RTN3-208ENST00000537981 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 MAML1Q92585 1016 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 TMIGD2Q96BF3 282 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 BTBD6Q96KE9 485 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 THTPAQ9BU02 230 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 CCDC28BQ9BUN5 200 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 KCNK13Q9HB14 408 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 SAR1AQ9NR31 198 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 PCYOX1Q9UHG3 505 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
RTN3-208ENST00000537981 TRIM17Q9Y577 477 aa11.28□□□□□ -0.6
RTN3-208ENST00000537981 SLIT3O75094 1523 aa11.27□□□□□ -0.6
RTN3-208ENST00000537981 B2RBV5 119 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 STAMBPO95630 424 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 ADRA1DP25100 572 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 CTNNA2P26232 953 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 COILP38432 576 aaPredicted RBP11.27□□□□□ -0.61
RTN3-208ENST00000537981 CHN2P52757 468 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 IFIT5Q13325 482 aaKnown RBP11.27□□□□□ -0.61
RTN3-208ENST00000537981 C16orf72Q14CZ0 275 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 SIX1Q15475 284 aaPredicted RBP11.27□□□□□ -0.61
RTN3-208ENST00000537981 USH1GQ495M9 461 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 MMEL1Q495T6 779 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 METTL24Q5JXM2 366 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PPP1R21Q6ZMI0 780 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 TRMT10CQ7L0Y3 403 aaKnown RBP11.27□□□□□ -0.61
RTN3-208ENST00000537981 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PNMA5Q96PV4 448 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 NMUR2Q9GZQ4 415 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 CPVLQ9H3G5 476 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 CROTQ9UKG9 612 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 LZTS1Q9Y250 596 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 NOX1Q9Y5S8 564 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 ZMYM2Q9UBW7 1377 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 TRMUO75648 421 aaKnown RBP11.27□□□□□ -0.61
RTN3-208ENST00000537981 CLPTM1O96005 669 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 FUCA1P04066 466 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 ENO1P06733 434 aaKnown RBP11.27□□□□□ -0.61
RTN3-208ENST00000537981 ESRRAP11474 423 aaPredicted RBP11.27□□□□□ -0.61
RTN3-208ENST00000537981 ITGA8P53708 1063 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PDE1BQ01064 536 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 KDSRQ06136 332 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 SPARCL1Q14515 664 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 BCL2A1Q16548 175 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 ECM1Q16610 540 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 LETM2Q2VYF4 491 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 ARSHQ5FYA8 562 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 IYDQ6PHW0 289 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 RHBDF2Q6PJF5 856 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 CATIPQ7Z7H3 387 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 TRABD2AQ86V40 505 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 TMPRSS6Q8IU80 811 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 ULK2Q8IYT8 1036 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 IRGQQ8WZA9 623 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 IP6K1Q92551 441 aa11.27□□□□□ -0.61
RTN3-208ENST00000537981 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms