RNA–Protein interactions for RNA: ENST00000537694.1

PPP1CA-209, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 882 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-209ENST00000537694 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 ZNF334Q9HCZ1 680 aaPredicted RBP16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 CEP72Q9P209 647 aa16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 CNTN3Q9P232 1028 aa16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 AFF4Q9UHB7 1163 aaKnown RBP16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 TIMM13Q9Y5L4 95 aaPredicted RBP16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 SPTBN2O15020 2390 aa16.66■□□□□ 0.26
PPP1CA-209ENST00000537694 SHISA7A6NL88 538 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 ABLIM1O14639 778 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 ZNF263O14978 683 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 CLDN3O15551 220 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 TOM1L1O75674 476 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 SYT1P21579 422 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 LONP1P36776 959 aaKnown RBP16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 MAPK7Q13164 816 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 SF3A1Q15459 793 aaKnown RBP16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 VITQ6UXI7 678 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 RNF19BQ6ZMZ0 732 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 KCNK18Q7Z418 384 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 GPIHBP1Q8IV16 184 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 PLIN2Q99541 437 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 SLITRK6Q9H5Y7 841 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 ASAH2Q9NR71 780 aa16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 SMG5Q9UPR3 1016 aaKnown RBP16.65■□□□□ 0.26
PPP1CA-209ENST00000537694 FANCMQ8IYD8 2048 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 MEFVO15553 781 aaPredicted RBP16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 LILRB5O75023 590 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 SDHBP21912 280 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 NRLP54845 237 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 PPP2R5DQ14738 602 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 TEAD2Q15562 447 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 HYIQ5T013 277 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 USP37Q86T82 979 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 MAP4K3Q8IVH8 894 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 ZSCAN18Q8TBC5 510 aaPredicted RBP16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 NELL1Q92832 810 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 SNX21Q969T3 373 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 FAM126AQ9BYI3 521 aaPredicted RBP16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 EPC1Q9H2F5 836 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 KCND2Q9NZV8 630 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 TUBGCP4Q9UGJ1 667 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 MAFFQ9ULX9 164 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 USP18Q9UMW8 372 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 PCDHB8Q9UN66 801 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 PIAS3Q9Y6X2 628 aa16.64■□□□□ 0.25
PPP1CA-209ENST00000537694 MOSPD3O75425 235 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 PLA2G4BP0C869 781 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 PLS3P13797 630 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 GUCY2CP25092 1073 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 YWHAHQ04917 246 aaPredicted RBP16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 NOLC1Q14978 699 aaKnown RBP eCLIP16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 LPAL2Q16609 132 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 MFSD6LQ8IWD5 586 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 YAF2Q8IY57 180 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 TMEM130Q8N3G9 435 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 SYT2Q8N9I0 419 aaPredicted RBP16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 LEMD2Q8NC56 503 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 CSGALNACT1Q8TDX6 532 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 SPIRE2Q8WWL2 714 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 PGLYRP2Q96PD5 576 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 GPR88Q9GZN0 384 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 ZSCAN16Q9H4T2 348 aaPredicted RBP16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 TRPV5Q9NQA5 729 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 RAB23Q9ULC3 237 aa16.63■□□□□ 0.25
PPP1CA-209ENST00000537694 HEPACAM2A8MVW5 462 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 STX6O43752 255 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 CLTAP09496 248 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 OR4Q2P0C623 313 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 CXCL8P10145 99 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 CCNE1P24864 410 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 CXCL12P48061 93 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 ATXN1P54253 815 aaKnown RBP16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 EPHB3P54753 998 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 DUSP4Q13115 394 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 ZPBP2Q6X784 338 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 DSTYKQ6XUX3 929 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 ZNF687Q8N1G0 1237 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 TMEM161BQ8NDZ6 487 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 DEPDC1BQ8WUY9 529 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 KIF12Q96FN5 646 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 BICD1Q96G01 975 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 PNMA5Q96PV4 448 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 CHRDQ9H2X0 955 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 PLEKHA5Q9HAU0 1116 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 PRMT8Q9NR22 394 aaPredicted RBP16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 GMEB2Q9UKD1 530 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 SLC27A5Q9Y2P5 690 aa16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 TPRP12270 2363 aaKnown RBP16.62■□□□□ 0.25
PPP1CA-209ENST00000537694 PRR5-ARHGAP8B1AHC4 643 aa16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 H0YCG3 227 aa16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 OAZ2O95190 189 aa16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 KRT18P05783 430 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 MAPTP10636 758 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 TXLNAP40222 546 aa16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 ALDH1A3P47895 512 aa16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 KPNA1P52294 538 aaPredicted RBP16.61■□□□□ 0.25
PPP1CA-209ENST00000537694 EPHA5P54756 1037 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms