RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MPPED1O15442 326 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 PROM1O43490 865 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 GRIA3P42263 894 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 KLF1Q13351 362 aaPredicted RBP6.96□□□□□ -1.3
CCDC7-208ENST00000537047 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 CLNKQ7Z7G1 428 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 TMIEQ8NEW7 156 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 ZNF778Q96MU6 729 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 TIMP4Q99727 224 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 WASHC2AQ641Q2 1341 aa6.96□□□□□ -1.3
CCDC7-208ENST00000537047 LINC00473A8K010 186 aa6.95□□□□□ -1.3
CCDC7-208ENST00000537047 PPP3CBP16298 524 aa6.95□□□□□ -1.3
CCDC7-208ENST00000537047 RPS7P62081 194 aaKnown RBP6.95□□□□□ -1.3
CCDC7-208ENST00000537047 EXOSC10Q01780 885 aaKnown RBP6.95□□□□□ -1.3
CCDC7-208ENST00000537047 DYRK1AQ13627 763 aa6.95□□□□□ -1.3
CCDC7-208ENST00000537047 RSPH3Q86UC2 560 aa6.95□□□□□ -1.3
CCDC7-208ENST00000537047 ADGRG5Q8IZF4 528 aa6.95□□□□□ -1.3
CCDC7-208ENST00000537047 SARAFQ96BY9 339 aa6.95□□□□□ -1.3
CCDC7-208ENST00000537047 TDP1Q9NUW8 608 aa6.95□□□□□ -1.3
CCDC7-208ENST00000537047 ITPKBP27987 946 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 WASP42768 502 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 IL10RAQ13651 578 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 TXNRD1Q16881 649 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 PABPC1LQ4VXU2 614 aaKnown RBP6.94□□□□□ -1.3
CCDC7-208ENST00000537047 KRT26Q7Z3Y9 468 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 GRASPQ7Z6J2 395 aaPredicted RBP6.94□□□□□ -1.3
CCDC7-208ENST00000537047 SCARB1Q8WTV0 552 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 JADE3Q92613 823 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 IMPG2Q9BZV3 1241 aa6.94□□□□□ -1.3
CCDC7-208ENST00000537047 KAT6AQ92794 2004 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 WDR91A4D1P6 747 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 K7ESF4 209 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 TOR1BO14657 336 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 NDUFS2O75306 463 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 VIL1P09327 827 aaKnown RBP6.93□□□□□ -1.3
CCDC7-208ENST00000537047 CPEP16870 476 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 GPD1P21695 349 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 C5AR1P21730 350 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 IARSP41252 1262 aaKnown RBP6.93□□□□□ -1.3
CCDC7-208ENST00000537047 ZNF81P51508 661 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 KRTAP10-9P60411 292 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 C3orf36Q3SXR2 165 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 AMOTL1Q8IY63 956 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 CFAP52Q8N1V2 620 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 PDPRQ8NCN5 879 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 ATL2Q8NHH9 583 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 LIMCH1Q9UPQ0 1083 aa6.93□□□□□ -1.3
CCDC7-208ENST00000537047 CD1AP06126 327 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 MTHFD1P11586 935 aaKnown RBP6.92□□□□□ -1.3
CCDC7-208ENST00000537047 ITGB6P18564 788 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 WT1P19544 449 aaPredicted RBP6.92□□□□□ -1.3
CCDC7-208ENST00000537047 EDNRBP24530 442 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 CDC42EP1Q00587 391 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 ZNF844Q08AG5 666 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 ATP2B3Q16720 1220 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 RNF219Q5W0B1 726 aaPredicted RBP6.92□□□□□ -1.3
CCDC7-208ENST00000537047 PGM2L1Q6PCE3 622 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 TMPRSS9Q7Z410 1059 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 NPM2Q86SE8 214 aaKnown RBP6.92□□□□□ -1.3
CCDC7-208ENST00000537047 CBARPQ8N350 705 aaPredicted RBP6.92□□□□□ -1.3
CCDC7-208ENST00000537047 CNTD1Q8N815 330 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCDC7-208ENST00000537047 IL17RDQ8NFM7 739 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 SMG7Q92540 1137 aaKnown RBP6.92□□□□□ -1.3
CCDC7-208ENST00000537047 JKAMPQ9P055 326 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 AOX1Q06278 1338 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 PHLDB1Q86UU1 1377 aa6.92□□□□□ -1.3
CCDC7-208ENST00000537047 CCDC195A0A1B0GUA6 201 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 TRIM75PA6NK02 468 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 E9PLN8 166 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 SLC43A1O75387 559 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 ANXA11P50995 505 aaKnown RBP6.91□□□□□ -1.3
CCDC7-208ENST00000537047 PTPRRQ15256 657 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 PREPLQ4J6C6 727 aaPredicted RBP6.91□□□□□ -1.3
CCDC7-208ENST00000537047 C1QL2Q7Z5L3 287 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 RASAL3Q86YV0 1011 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 KAT5Q92993 513 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 DMRTA2Q96SC8 542 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 VKORC1Q9BQB6 163 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 PACSIN1Q9BY11 444 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 KMT5AQ9NQR1 393 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 MRPS18AQ9NVS2 196 aaKnown RBP6.91□□□□□ -1.3
CCDC7-208ENST00000537047 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.91□□□□□ -1.3
CCDC7-208ENST00000537047 IPPQ9Y573 584 aa6.91□□□□□ -1.3
CCDC7-208ENST00000537047 CCDC151A5D8V7 595 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 PCDHGA12O60330 932 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 MT-CO1P00395 513 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 RHOP08100 348 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 ACAP2Q15057 778 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 INAVAQ3KP66 663 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 LCE1AQ5T7P2 110 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 ZNF365Q70YC5 407 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 MIGA2Q7L4E1 593 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 BHLHA9Q7RTU4 235 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 SNX19Q92543 992 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 PGBD1Q96JS3 809 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 MRGPRX4Q96LA9 322 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.3
CCDC7-208ENST00000537047 PCDHGA9Q9Y5G4 932 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms