RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	FBLN5	Q9UBX5	448 aa		7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	DDX49	Q9Y6V7	483 aa	Known RBP	7.14	□□□□□ -1.27
PICALM-223	ENST00000534412	BAZ2A	Q9UIF9	1905 aa	Known RBP	7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	LCHN	A4D1U4	455 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	TMEM232	C9JQI7	657 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	DDAH1	O94760	285 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	PLA2G1B	P04054	148 aa	Known RBP	7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	ALAD	P13716	330 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	MRE11	P49959	708 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	WDR5	P61964	334 aa	Known RBP	7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	NHLH1	Q02575	133 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	RBL2	Q08999	1139 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	BFSP2	Q13515	415 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	GPNMB	Q14956	572 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	FXN	Q16595	210 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	SLFN13	Q68D06	897 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	ZSCAN25	Q6NSZ9	544 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	EEPD1	Q7L9B9	569 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	FAM160B2	Q86V87	743 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	SMARCC2	Q8TAQ2	1214 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	GDPD5	Q8WTR4	605 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	SNX27	Q96L92	541 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	CTAGE1	Q96RT6	745 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	MTG1	Q9BT17	334 aa	Predicted RBP	7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	BOLA2	Q9H3K6	86 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	ZNF287	Q9HBT7	754 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	TRIO	O75962	3097 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	MCM3AP	O60318	1980 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	MYO15A	Q9UKN7	3530 aa		7.13	□□□□□ -1.27
PICALM-223	ENST00000534412	BRWD1	Q9NSI6	2320 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	SCN10A	Q9Y5Y9	1956 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	RAB11FIP3	O75154	756 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	PRDM1	O75626	825 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	GJB5	O95377	273 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	CXCL10	P02778	98 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	CELA3B	P08861	270 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	EDNRB	P24530	442 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	HOXC12	P31275	282 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	SLC1A4	P43007	532 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	KCNJ6	P48051	423 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	ERVK-21	P61565	698 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	RPL11	P62913	178 aa	Known RBP	7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	VWA3B	Q502W6	1294 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	MUM1L1	Q5H9M0	696 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	LIPI	Q6XZB0	460 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	SESTD1	Q86VW0	696 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	CAGE1	Q8TC20	777 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	NEK9	Q8TD19	979 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	AFAP1L1	Q8TED9	768 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	CHURC1	Q8WUH1	139 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	STAG1	Q8WVM7	1258 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	MRGPRX3	Q96LB0	322 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	WDR11	Q9BZH6	1224 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	ADD3	Q9UEY8	706 aa	Known RBP	7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	CFAP54	Q96N23	3096 aa		7.12	□□□□□ -1.27
PICALM-223	ENST00000534412	RAD50	Q92878	1312 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	LINC01553	A4QN01	128 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	C22orf46	C9J442	243 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	NKRF	O15226	690 aa	Known RBP eCLIP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	DCX	O43602	365 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	SMARCA5	O60264	1052 aa	Predicted RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	KPNA6	O60684	536 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	PARN	O95453	639 aa	Known RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ICAM1	P05362	532 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	SNRPB2	P08579	225 aa	Known RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ALAS1	P13196	640 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	IL9	P15248	144 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	GNAT2	P19087	354 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	KCNA5	P22460	613 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ECI1	P42126	302 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	NOV	P48745	357 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ALDH5A1	P51649	535 aa	Predicted RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	DEFB103A	P81534	67 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	BRDT	Q58F21	947 aa	Predicted RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	FAM47C	Q5HY64	1035 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	E4F1	Q66K89	784 aa	Predicted RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	TEX2	Q8IWB9	1127 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ADGRG2	Q8IZP9	1017 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ZNF444	Q8N0Y2	327 aa	Predicted RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	PLEKHO2	Q8TD55	490 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	BTN2A2	Q8WVV5	523 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	APPBP2	Q92624	585 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	DIO2	Q92813	273 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	OSBP2	Q969R2	916 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	TGS1	Q96RS0	853 aa	Known RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	RAD9A	Q99638	391 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	SPATA25	Q9BR10	227 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	FTO	Q9C0B1	505 aa	Known RBP eCLIP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ADAM7	Q9H2U9	754 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	PCDH18	Q9HCL0	1135 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	PRKAG3	Q9UGI9	489 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	SIT1	Q9Y3P8	196 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	TIMM13	Q9Y5L4	95 aa	Predicted RBP	7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	COL4A6	Q14031	1691 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	LCT	P09848	1927 aa		7.11	□□□□□ -1.27
PICALM-223	ENST00000534412	ABHD14A-ACY1	A0A1B0GW23	586 aa		7.1	□□□□□ -1.27
PICALM-223	ENST00000534412	SH3D21	A4FU49	640 aa		7.1	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms