RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 TCF7P36402 384 aaPredicted RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 IREB2P48200 963 aaKnown RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 KLF1Q13351 362 aaPredicted RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 MAMLD1Q13495 774 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 PLCB4Q15147 1175 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 MAPK6Q16659 721 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 DUOXA2Q1HG44 320 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 ZNF568Q3ZCX4 644 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 RHBDF2Q6PJF5 856 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 TMEM35BQ8NCS4 154 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 IPO4Q8TEX9 1081 aaKnown RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 CPA5Q8WXQ8 436 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 PCYT2Q99447 389 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 FRMD8P1Q9BZ68 369 aaPredicted RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 NIF3L1Q9GZT8 377 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 HAPLN2Q9GZV7 340 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 APOBEC3GQ9HC16 384 aaKnown RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATM-222ENST00000533733 DDX56Q9NY93 547 aaKnown RBP12.71□□□□□ -0.37
ATM-222ENST00000533733 ASIC3Q9UHC3 531 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 PCDHGC3Q9UN70 934 aa12.71□□□□□ -0.37
ATM-222ENST00000533733 TLR3O15455 904 aaKnown RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 MMP8P22894 467 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 EIF4BP23588 611 aaKnown RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 POLR2BP30876 1174 aaKnown RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 IRX3P78415 501 aaPredicted RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 CNTN2Q02246 1040 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 POU5F1BQ06416 359 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 VGLL4Q14135 290 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 PIGHQ14442 188 aaPredicted RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 ERMARDQ5T6L9 678 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 ZNF365Q70YC5 407 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 ZNF606Q8WXB4 792 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 SCLT1Q96NL6 688 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 NFKBIZQ9BYH8 718 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 OSBPL8Q9BZF1 889 aa12.71□□□□□ -0.38
ATM-222ENST00000533733 ACTR5Q9H9F9 607 aaPredicted RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 PPANQ9NQ55 473 aaKnown RBP12.71□□□□□ -0.38
ATM-222ENST00000533733 PTPRJQ12913 1337 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 A0A0G2JLL6 359 aaPredicted RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 TCRBV7S2A1N4TA0A589 114 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 IL18RAPO95256 599 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 PRKCBP05771 671 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 TRPC3Q13507 836 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 KYAT1Q16773 422 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 TTC31Q49AM3 519 aaPredicted RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 LMBRD2Q68DH5 695 aaPredicted RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 PRRT2Q7Z6L0 340 aaPredicted RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 CCDC50Q8IVM0 306 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 RIBC1Q8N443 379 aaPredicted RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 NIPA2Q8N8Q9 360 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 RAPGEF5Q92565 580 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 ANKRD36BP1Q96IX9 119 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 ZBTB45Q96K62 511 aaPredicted RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 XPO6Q96QU8 1125 aaKnown RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 CCDC77Q9BR77 488 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 NSRP1Q9H0G5 558 aaKnown RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 SEMA4AQ9H3S1 761 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 PPCSQ9HAB8 311 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 BTBD7Q9P203 1132 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 CPSF3Q9UKF6 684 aaKnown RBP12.7□□□□□ -0.38
ATM-222ENST00000533733 EFR3BQ9Y2G0 817 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 PTPN22Q9Y2R2 807 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 NUB1Q9Y5A7 615 aa12.7□□□□□ -0.38
ATM-222ENST00000533733 TRIM66O15016 1216 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 MED7O43513 233 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 FAM189A1O60320 539 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 B4GALT4O60513 344 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 TJP3O95049 919 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 FSBPO95073 299 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 TNNC2P02585 160 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 RDXP35241 583 aaKnown RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 GSCP56915 257 aaPredicted RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 C6orf89Q6UWU4 347 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 MPZL3Q6UWV2 235 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 TSHZ1Q6ZSZ6 1077 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 NCAPG2Q86XI2 1143 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 CACNA2D3Q8IZS8 1091 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 ZNF526Q8TF50 670 aaPredicted RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 PRPF31Q8WWY3 499 aaKnown RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 TCHPQ9BT92 498 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 CDC42EP4Q9H3Q1 356 aaKnown RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 ADARB2Q9NS39 739 aaKnown RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 CHORDC1Q9UHD1 332 aaPredicted RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 DRG1Q9Y295 367 aaKnown RBP12.69□□□□□ -0.38
ATM-222ENST00000533733 TELO2Q9Y4R8 837 aa12.69□□□□□ -0.38
ATM-222ENST00000533733 TMEM191CA6NGB0 347 aa12.68□□□□□ -0.38
ATM-222ENST00000533733 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
ATM-222ENST00000533733 ACKR2O00590 384 aa12.68□□□□□ -0.38
ATM-222ENST00000533733 HBP1O60381 514 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms