RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CNTN6Q9UQ52 1028 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 A0A0B4J269 797 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 IGKV6-21A0A0C4DH24 114 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 POLR3GO15318 223 aaPredicted RBP10.34□□□□□ -0.75
CHKA-207ENST00000533728 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 GLI1P08151 1106 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 CYP2C8P10632 490 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 DRG2P55039 364 aaKnown RBP10.34□□□□□ -0.75
CHKA-207ENST00000533728 PTENP60484 403 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 CNTN2Q02246 1040 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 PPFIA1Q13136 1202 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 DHX34Q14147 1143 aaKnown RBP10.34□□□□□ -0.75
CHKA-207ENST00000533728 MXD4Q14582 209 aaPredicted RBP10.34□□□□□ -0.75
CHKA-207ENST00000533728 WDR44Q5JSH3 913 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 CDCA2Q69YH5 1023 aaPredicted RBP10.34□□□□□ -0.75
CHKA-207ENST00000533728 ACAD10Q6JQN1 1059 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 LRIG3Q6UXM1 1119 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 SEPT14Q6ZU15 432 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 SND1Q7KZF4 910 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHKA-207ENST00000533728 ZSWIM2Q8NEG5 633 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 TAS1R2Q8TE23 839 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 HDAC7Q8WUI4 952 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 SLC20A1Q8WUM9 679 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 CCDC127Q96BQ5 260 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 LRRC45Q96CN5 670 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 ARHGEF26Q96DR7 871 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 SAAL1Q96ER3 474 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 VCPIP1Q96JH7 1222 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 PCYT2Q99447 389 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 SH2D3AQ9BRG2 576 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 KIFC3Q9BVG8 833 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 PLVAPQ9BX97 442 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 RAB17Q9H0T7 212 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 THAP2Q9H0W7 228 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 C2orf40Q9H1Z8 148 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 EPB41L5Q9HCM4 733 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 EHD2Q9NZN4 543 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 TRPC6Q9Y210 931 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 PCDHB2Q9Y5E7 798 aa10.34□□□□□ -0.75
CHKA-207ENST00000533728 PDCD11Q14690 1871 aaKnown RBP10.34□□□□□ -0.75
CHKA-207ENST00000533728 GRXCR1A8MXD5 290 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 AGPSO00116 658 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 KRIT1O00522 736 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 ASAP2O43150 1006 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 CYP26A1O43174 497 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 SART1O43290 800 aaKnown RBP10.33□□□□□ -0.76
CHKA-207ENST00000533728 RAD51CO43502 376 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 HSF2BPO75031 334 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 PRKAR2AP13861 404 aaKnown RBP10.33□□□□□ -0.76
CHKA-207ENST00000533728 HSPA9P38646 679 aaKnown RBP10.33□□□□□ -0.76
CHKA-207ENST00000533728 MATR3P43243 847 aaKnown RBP eCLIP10.33□□□□□ -0.76
CHKA-207ENST00000533728 GUCY2DQ02846 1103 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 POU5F1BQ06416 359 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 PTP4A2Q12974 167 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 MTMR3Q13615 1198 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 CLEC16AQ2KHT3 1053 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 CELF3Q5SZQ8 465 aaKnown RBP10.33□□□□□ -0.76
CHKA-207ENST00000533728 EMC10Q5UCC4 262 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 TAF3Q5VWG9 929 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 NCAPG2Q86XI2 1143 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 PALB2Q86YC2 1186 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 BRSK2Q8IWQ3 736 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 IQCKQ8N0W5 287 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 ASAP3Q8TDY4 903 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 ATP8B4Q8TF62 1192 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 CASKIN2Q8WXE0 1202 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 ATOH1Q92858 354 aaPredicted RBP10.33□□□□□ -0.76
CHKA-207ENST00000533728 CD101Q93033 1021 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 PCDHB18PQ96TA0 734 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 ZSWIM1Q9BR11 485 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 FAM213AQ9BRX8 229 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 NFKBIZQ9BYH8 718 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 CCDC113Q9H0I3 377 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 AZI2Q9H6S1 392 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 OSGEPQ9NPF4 335 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 SEPT11Q9NVA2 429 aaKnown RBP10.33□□□□□ -0.76
CHKA-207ENST00000533728 TAS2R14Q9NYV8 317 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 SMARCAL1Q9NZC9 954 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 CTTNBP2NLQ9P2B4 639 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 PACSIN2Q9UNF0 486 aaPredicted RBP10.33□□□□□ -0.76
CHKA-207ENST00000533728 ALG6Q9Y672 507 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 BPTFQ12830 3046 aa10.33□□□□□ -0.76
CHKA-207ENST00000533728 LRRIQ4A6NIV6 560 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 ASB14A6NK59 587 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 RNF40O75150 1001 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 TOM1L1O75674 476 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 ZMYND10O75800 440 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 HLA-DRAP01903 254 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 CYP1A1P04798 512 aaPredicted RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 UNGP13051 313 aaPredicted RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 ABCB4P21439 1286 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 CHRNA3P32297 505 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 CTNNA1P35221 906 aaKnown RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 TCF7P36402 384 aaPredicted RBP10.32□□□□□ -0.76
CHKA-207ENST00000533728 SLC1A1P43005 524 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 ERVK-9P63128 1117 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 SLC7A5Q01650 507 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 CYP1B1Q16678 543 aa10.32□□□□□ -0.76
CHKA-207ENST00000533728 MAP3K21Q5TCX8 1036 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms