RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 TMEM169Q96HH4 297 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 UROC1Q96N76 676 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 ARID3AQ99856 593 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 TUBGCP2Q9BSJ2 902 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 HERC2P3Q9BVR0 1158 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 NAT10Q9H0A0 1025 aaKnown RBP8.5□□□□□ -1.05
COMMD9-207ENST00000533308 SDCBP2Q9H190 292 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 RBSNQ9H1K0 784 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 VPS16Q9H269 839 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 SMYD3Q9H7B4 428 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 METTL14Q9HCE5 456 aaKnown RBP8.5□□□□□ -1.05
COMMD9-207ENST00000533308 TMEM8AQ9HCN3 771 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 AAASQ9NRG9 546 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 MAGEC2Q9UBF1 373 aaPredicted RBP8.5□□□□□ -1.05
COMMD9-207ENST00000533308 AJAP1Q9UKB5 411 aaPredicted RBP8.5□□□□□ -1.05
COMMD9-207ENST00000533308 ITGA11Q9UKX5 1188 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 NUB1Q9Y5A7 615 aa8.5□□□□□ -1.05
COMMD9-207ENST00000533308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.5□□□□□ -1.05
COMMD9-207ENST00000533308 TIMM13Q9Y5L4 95 aaPredicted RBP8.5□□□□□ -1.05
COMMD9-207ENST00000533308 SF3B1O75533 1304 aaKnown RBP eCLIP8.5□□□□□ -1.05
COMMD9-207ENST00000533308 REV3LO60673 3130 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 HIDE1A8MVS5 230 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 BECN2A8MW95 431 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 ADAM12O43184 909 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 CLSTN1O94985 981 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 RPL17P18621 184 aaKnown RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 EEF1GP26641 437 aaKnown RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 RPL9P32969 192 aaKnown RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 PPM1AP35813 382 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 TAF6P49848 677 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 COPB1P53618 953 aaKnown RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 RBP5P82980 135 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 PLCB3Q01970 1234 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 ENPEPQ07075 957 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 LRMPQ12912 555 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 TRPC3Q13507 836 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 ZNF699Q32M78 642 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 VWA3BQ502W6 1294 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 KRT39Q6A163 491 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 GJB7Q6PEY0 223 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 RSPO2Q6UXX9 243 aaPredicted RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 CEP57Q86XR8 500 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 ARHGEF19Q8IW93 802 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 FAM114A1Q8IWE2 563 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 VPS52Q8N1B4 723 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 LMO3Q8TAP4 145 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 CACTINQ8WUQ7 758 aaKnown RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 KAT5Q92993 513 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 DDX27Q96GQ7 796 aaKnown RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 HPDLQ96IR7 371 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 SUSD3Q96L08 255 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 ZNF560Q96MR9 790 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 GUCD1Q96NT3 240 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 SAMD11Q96NU1 681 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 TSPAN18Q96SJ8 248 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 TCF25Q9BQ70 676 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 MRPL45Q9BRJ2 306 aaKnown RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 CRACR2AQ9BSW2 395 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 C11orf84Q9BUA3 381 aaPredicted RBP8.49□□□□□ -1.05
COMMD9-207ENST00000533308 COLEC11Q9BWP8 271 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 ZBP1Q9H171 429 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 GCNT4Q9P109 453 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 HMGXB4Q9UGU5 601 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 L1RE1Q9UN81 338 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 RWDD3Q9Y3V2 267 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 SNX9Q9Y5X1 595 aa8.49□□□□□ -1.05
COMMD9-207ENST00000533308 TMEM265A0A087WTH1 108 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 SMTNL1A8MU46 457 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 LGALS16A8MUM7 142 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 KPNA7A9QM74 516 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 M0QZQ0 153 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 PES1O00541 588 aaKnown RBP8.48□□□□□ -1.05
COMMD9-207ENST00000533308 FSCN2O14926 492 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 AP5Z1O43299 807 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 ASS1P00966 412 aaKnown RBP8.48□□□□□ -1.05
COMMD9-207ENST00000533308 SOD2P04179 222 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 RB1P06400 928 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 OR4Q2P0C623 313 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 FGFR3P22607 806 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 GTF2H1P32780 548 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 CA8P35219 290 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 GTF2F1P35269 517 aaKnown RBP eCLIP8.48□□□□□ -1.05
COMMD9-207ENST00000533308 ASPAP45381 313 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 AP3M2P53677 418 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 CDH8P55286 799 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 NOP14P78316 857 aaKnown RBP8.48□□□□□ -1.05
COMMD9-207ENST00000533308 RBM10P98175 930 aaKnown RBP8.48□□□□□ -1.05
COMMD9-207ENST00000533308 KCNMA1Q12791 1236 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 ORC1Q13415 861 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 PTPN14Q15678 1187 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 SV2CQ496J9 727 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 VARS2Q5ST30 1063 aaKnown RBP8.48□□□□□ -1.05
COMMD9-207ENST00000533308 KIAA0319Q5VV43 1072 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 WSCD1Q658N2 575 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 DSTYKQ6XUX3 929 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 DDX53Q86TM3 631 aaKnown RBP8.48□□□□□ -1.05
COMMD9-207ENST00000533308 GLYCTKQ8IVS8 523 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 PDCL2Q8N4E4 241 aa8.48□□□□□ -1.05
COMMD9-207ENST00000533308 LRRC52Q8N7C0 313 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms