RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 C18orf25Q96B23 403 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-208ENST00000533123 PGBD4Q96DM1 585 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 RSAD1Q9HA92 442 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 C1orf112Q9NSG2 853 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 PRKAG2Q9UGJ0 569 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 ADAMTS1Q9UHI8 967 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 GIT1Q9Y2X7 761 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 PTGESO14684 152 aa19.85■□□□□ 0.77
SMPD1-208ENST00000533123 RFC2P35250 354 aa19.85■□□□□ 0.77
SMPD1-208ENST00000533123 NCOA4Q13772 614 aa19.85■□□□□ 0.77
SMPD1-208ENST00000533123 ZBTB6Q15916 424 aa19.85■□□□□ 0.77
SMPD1-208ENST00000533123 C7orf61Q8IZ16 206 aa19.85■□□□□ 0.77
SMPD1-208ENST00000533123 RALGAPA2Q2PPJ7 1873 aa19.85■□□□□ 0.77
SMPD1-208ENST00000533123 MACROD2A1Z1Q3 448 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 KRT86O43790 486 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 KRT19P08727 400 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 KCNE1P15382 129 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 SOX5P35711 763 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 STAT1P42224 750 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 MAGEA1P43355 309 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 NT5DC4Q86YG4 428 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 TMEM199Q8N511 208 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 LRRN4CLQ8ND94 238 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 KAT5Q92993 513 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 UBE2TQ9NPD8 197 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-208ENST00000533123 MIOSQ9NXC5 875 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 DPP3Q9NY33 737 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 TUBGCP4Q9UGJ1 667 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 DERAQ9Y315 318 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-208ENST00000533123 EOMESO95936 686 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 ITGB3P05106 788 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 KIF5AQ12840 1032 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 SLC18A3Q16572 532 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 RPS6KC1Q96S38 1066 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 SIX4Q9UIU6 781 aa19.84■□□□□ 0.77
SMPD1-208ENST00000533123 EVI5O60447 810 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 ACRP10323 421 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 PRKCIP41743 596 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 TRPC3Q13507 836 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 SPOPLQ6IQ16 392 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 CNKSR3Q6P9H4 555 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 MYO1AQ9UBC5 1043 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 INPP5FQ9Y2H2 1132 aa19.83■□□□□ 0.77
SMPD1-208ENST00000533123 CLSTN1O94985 981 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 FGFR1P11362 822 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 SCNN1GP51170 649 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 MYL6P60660 151 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 IKBKEQ14164 716 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 CXorf38Q8TB03 319 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 TATDN2Q93075 761 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 GOLGA2P5Q9HBQ8 144 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 UBQLN1Q9UMX0 589 aaKnown RBP19.83■□□□□ 0.76
SMPD1-208ENST00000533123 TTC3P53804 2025 aa19.83■□□□□ 0.76
SMPD1-208ENST00000533123 CTIFO43310 598 aaKnown RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 POMCP01189 267 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 FERP16591 822 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 SOX4Q06945 474 aaPredicted RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 DNAAF5Q86Y56 855 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 BEST2Q8NFU1 509 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 PPP1R10Q96QC0 940 aaKnown RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 UBN1Q9NPG3 1134 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 TMEM161AQ9NX61 479 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 BZW2Q9Y6E2 419 aaKnown RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 PDCD11Q14690 1871 aaKnown RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 FOXN3O00409 490 aaPredicted RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 SYN1P17600 705 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 POLR2BP30876 1174 aaKnown RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 NAA30Q147X3 362 aaPredicted RBP19.82■□□□□ 0.76
SMPD1-208ENST00000533123 HELQQ8TDG4 1101 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 BADQ92934 168 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 HTATIP2Q9BUP3 242 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 PACSIN1Q9BY11 444 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 TSGA10Q9BZW7 698 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 AGAP1Q9UPQ3 857 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 PCDHB7Q9Y5E2 793 aa19.82■□□□□ 0.76
SMPD1-208ENST00000533123 MICAL3Q7RTP6 2002 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 THP07101 528 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 RFX1P22670 979 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 DMTNQ08495 405 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 WDR44Q5JSH3 913 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 CLLU1OSQ5K130 101 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 RPUSD2Q8IZ73 545 aaKnown RBP19.81■□□□□ 0.76
SMPD1-208ENST00000533123 PPM1KQ8N3J5 372 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 OLIG1Q8TAK6 271 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 NT5C1BQ96P26 610 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 APOBEC3GQ9HC16 384 aaKnown RBP19.81■□□□□ 0.76
SMPD1-208ENST00000533123 SALL4Q9UJQ4 1053 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 ITGA11Q9UKX5 1188 aa19.81■□□□□ 0.76
SMPD1-208ENST00000533123 CTAGE9A4FU28 777 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 SLU7O95391 586 aaKnown RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 FAM43BQ6ZT52 329 aaPredicted RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 ANKRD7Q92527 254 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 KREMEN1Q96MU8 473 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 TSPAN18Q96SJ8 248 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 XYLT2Q9H1B5 865 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 ELAC1Q9H777 363 aaKnown RBP19.8■□□□□ 0.76
SMPD1-208ENST00000533123 CACNG4Q9UBN1 327 aa19.8■□□□□ 0.76
SMPD1-208ENST00000533123 MRFAP1Q9Y605 127 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms