RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 ALG13Q9NP73 1137 aaKnown RBP10□□□□□ -0.81
TRIM53AP-201ENST00000532014 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.81
TRIM53AP-201ENST00000532014 TAB2Q9NYJ8 693 aa10□□□□□ -0.81
TRIM53AP-201ENST00000532014 AGAP1Q9UPQ3 857 aa10□□□□□ -0.81
TRIM53AP-201ENST00000532014 FAN1Q9Y2M0 1017 aa10□□□□□ -0.81
TRIM53AP-201ENST00000532014 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10□□□□□ -0.81
TRIM53AP-201ENST00000532014 PLXNA3P51805 1871 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 SMTNL1A8MU46 457 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 BECN2A8MW95 431 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 RFXAPO00287 272 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 GRM6O15303 877 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 XPOTO43592 962 aaKnown RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 ASS1P00966 412 aaKnown RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 HLA-DRAP01903 254 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 TNNC2P02585 160 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 AFPP02771 609 aaKnown RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 KRT19P08727 400 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 PRKCSHP14314 528 aaPredicted RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 MTIF2P46199 727 aaKnown RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 AP3M2P53677 418 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 PLCB3Q01970 1234 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 KCNMA1Q12791 1236 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 NCOA4Q13772 614 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 PTPN21Q16825 1174 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 VWA3BQ502W6 1294 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 HABP4Q5JVS0 413 aaKnown RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 FUT10Q6P4F1 479 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 DCLRE1AQ6PJP8 1040 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 LIMS2Q7Z4I7 341 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 FAM114A1Q8IWE2 563 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 LRRC52Q8N7C0 313 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 SPPL3Q8TCT6 385 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 GDPD5Q8WTR4 605 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 DDX27Q96GQ7 796 aaKnown RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 NAP1L5Q96NT1 182 aaPredicted RBP9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 VPS16Q9H269 839 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 NDST4Q9H3R1 872 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 ZNF576Q9H609 170 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 VRTNQ9H8Y1 702 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 NME7Q9Y5B8 376 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 PCDHGC5Q9Y5F6 944 aa9.99□□□□□ -0.81
TRIM53AP-201ENST00000532014 H3BNC9 293 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 M0QZQ0 153 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 TEX33O43247 280 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 TKTP29401 623 aaKnown RBP9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 COPB1P53618 953 aaKnown RBP9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 ERVFC1P60507 584 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 RBP5P82980 135 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 MYL7Q01449 175 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 BIRC3Q13489 604 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 RTP2Q5QGT7 225 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 USP37Q86T82 979 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 FBXL13Q8NEE6 735 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 ARNTL2Q8WYA1 636 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 HPDLQ96IR7 371 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 SUSD3Q96L08 255 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 CRACR2AQ9BSW2 395 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 PLVAPQ9BX97 442 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 CHST7Q9NS84 486 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 RAB20Q9NX57 234 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 GDAP2Q9NXN4 497 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 SPG21Q9NZD8 308 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 POLIQ9UNA4 740 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 NUB1Q9Y5A7 615 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 PCDHB12Q9Y5F1 795 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 PRRC2BQ5JSZ5 2229 aaKnown RBP9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 PTPRDP23468 1912 aa9.98□□□□□ -0.81
TRIM53AP-201ENST00000532014 A0A1B0GTH6 734 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 KPNA7A9QM74 516 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 HCRTO43612 131 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 STAU1O95793 577 aaKnown RBP9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 SLC9A1P19634 815 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 IRS1P35568 1242 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 PPM1AP35813 382 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 PIK3CAP42336 1068 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 ASPAP45381 313 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 TAF6P49848 677 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 KLK7P49862 253 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 FXR1P51114 621 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 GRIN2CQ14957 1233 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 SOWAHAQ2M3V2 549 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 RSPO2Q6UXX9 243 aaPredicted RBP9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 DDX53Q86TM3 631 aaKnown RBP9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 POF1BQ8WVV4 589 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 KBTBD7Q8WVZ9 684 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 AUTS2Q8WXX7 1259 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 TATDN2Q93075 761 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 TMEM169Q96HH4 297 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 ARID3AQ99856 593 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 RTP3Q9BQQ7 232 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 COLEC11Q9BWP8 271 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 ZBP1Q9H171 429 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 SDCBP2Q9H190 292 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 SIX2Q9NPC8 291 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 AAASQ9NRG9 546 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 GCNT4Q9P109 453 aa9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 MAGEC2Q9UBF1 373 aaPredicted RBP9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 AJAP1Q9UKB5 411 aaPredicted RBP9.97□□□□□ -0.81
TRIM53AP-201ENST00000532014 L1RE1Q9UN81 338 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms