RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	OR5B17	Q8NGF7	314 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	SUSD6	Q92537	303 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	ANKRD36BP1	Q96IX9	119 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	MFSD14A	Q96MC6	490 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	ZNF560	Q96MR9	790 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	GTPBP4	Q9BZE4	634 aa	Known RBP	27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	SFXN1	Q9H9B4	322 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	DPP7	Q9UHL4	492 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558	CDY1	Q9Y6F8	540 aa		27.87	■■■□□ 2.05
PICALM-215	ENST00000531558		H7C4K7	107 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	TBC1D4	O60343	1298 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	DLAT	P10515	647 aa	Known RBP	27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	OR1D2	P34982	312 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	ITIH3	Q06033	890 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	RAB33A	Q14088	237 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	NFIL3	Q16649	462 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	ZCWPW2	Q504Y3	356 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	RARS2	Q5T160	578 aa	Known RBP	27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	ZNF280D	Q6N043	979 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	CXorf38	Q8TB03	319 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	HDAC7	Q8WUI4	952 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	CCDC127	Q96BQ5	260 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	SENP8	Q96LD8	212 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	FNBP1	Q96RU3	617 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	UHRF1	Q96T88	793 aa	Predicted RBP	27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	CGRRF1	Q99675	332 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	COL25A1	Q9BXS0	654 aa	Predicted RBP	27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	ADAM7	Q9H2U9	754 aa		27.86	■■■□□ 2.05
PICALM-215	ENST00000531558	SPDYE4	A6NLX3	237 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	TNNC2	P02585	160 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	SPATA31D3	P0C874	917 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	ODC1	P11926	461 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	TYMP	P19971	482 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	PNPLA4	P41247	253 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	PRCP	P42785	496 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	DUOXA2	Q1HG44	320 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	SLC8B1	Q6J4K2	584 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	SPATA31D4	Q6ZUB0	917 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	GZF1	Q9H116	711 aa	Predicted RBP	27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	PLEKHA4	Q9H4M7	779 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	SIX4	Q9UIU6	781 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	FBXW11	Q9UKB1	542 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	MAN1B1	Q9UKM7	699 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	AGAP1	Q9UPQ3	857 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	TIMM13	Q9Y5L4	95 aa	Predicted RBP	27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	PLXNA3	P51805	1871 aa		27.85	■■■□□ 2.05
PICALM-215	ENST00000531558	OAZ2	O95190	189 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	NR2F2	P24468	414 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	YWHAH	Q04917	246 aa	Predicted RBP	27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	SV2C	Q496J9	727 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	CTXN3	Q4LDR2	81 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	CES5A	Q6NT32	575 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	CSGALNACT2	Q8N6G5	542 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	LRRC52	Q8N7C0	313 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	KREMEN2	Q8NCW0	462 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	NECAB3	Q96P71	396 aa	Predicted RBP	27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	GBP4	Q96PP9	640 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	FBXL5	Q9UKA1	691 aa		27.84	■■■□□ 2.05
PICALM-215	ENST00000531558	NCOR1	O75376	2440 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	TCF20	Q9UGU0	1960 aa	Known RBP	27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	ARHGEF37	A1IGU5	675 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	TNNI1	P19237	187 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	CASP4	P49662	377 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	RBP5	P82980	135 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	SCARA3	Q6AZY7	606 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	USP37	Q86T82	979 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	CMAS	Q8NFW8	434 aa	Predicted RBP	27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	PLEKHO2	Q8TD55	490 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	BORCS6	Q96GS4	357 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	POP1	Q99575	1024 aa	Known RBP	27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	PRKAG3	Q9UGI9	489 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	FRMD4B	Q9Y2L6	1034 aa		27.83	■■■□□ 2.05
PICALM-215	ENST00000531558	SCN1A	P35498	2009 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	BDP1	A6H8Y1	2624 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	KPNA7	A9QM74	516 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	CYP11A1	P05108	521 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	KRT19	P08727	400 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	RPL13	P26373	211 aa	Known RBP	27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	ROR1	Q01973	937 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	EDRF1	Q3B7T1	1238 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	CEP135	Q66GS9	1140 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	TMC5	Q6UXY8	1006 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	ADSSL1	Q8N142	457 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	CDH22	Q9UJ99	828 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	C5orf42	Q9H799	3197 aa		27.82	■■■□□ 2.04
PICALM-215	ENST00000531558	CBX2	Q14781	532 aa	Predicted RBP	27.81	■■■□□ 2.04
PICALM-215	ENST00000531558	ISM2	Q6H9L7	571 aa		27.81	■■■□□ 2.04
PICALM-215	ENST00000531558	OVOS1	Q6IE37	1185 aa		27.81	■■■□□ 2.04
PICALM-215	ENST00000531558	TRAPPC11	Q7Z392	1133 aa		27.81	■■■□□ 2.04
PICALM-215	ENST00000531558	PARD3B	Q8TEW8	1205 aa		27.81	■■■□□ 2.04
PICALM-215	ENST00000531558	OXCT2	Q9BYC2	517 aa	Predicted RBP	27.81	■■■□□ 2.04
PICALM-215	ENST00000531558	DSE	Q9UL01	958 aa		27.81	■■■□□ 2.04
PICALM-215	ENST00000531558	CYB561D2	O14569	222 aa		27.8	■■■□□ 2.04
PICALM-215	ENST00000531558	MAPK13	O15264	365 aa		27.8	■■■□□ 2.04
PICALM-215	ENST00000531558	RFPL2	O75678	378 aa		27.8	■■■□□ 2.04
PICALM-215	ENST00000531558	WEE2	P0C1S8	567 aa		27.8	■■■□□ 2.04
PICALM-215	ENST00000531558	ZP2	Q05996	745 aa		27.8	■■■□□ 2.04
PICALM-215	ENST00000531558	BFSP1	Q12934	665 aa		27.8	■■■□□ 2.04
PICALM-215	ENST00000531558	MORC3	Q14149	939 aa		27.8	■■■□□ 2.04
PICALM-215	ENST00000531558	LIN9	Q5TKA1	542 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms