RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SMTNP53814 917 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 ATP2C1P98194 919 aaPredicted RBP20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 MCL1Q07820 350 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 MTAPQ13126 283 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 ZPBP2Q6X784 338 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 DGLUCYQ7Z3D6 616 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 ZNF687Q8N1G0 1237 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 KIF12Q96FN5 646 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 BICD1Q96G01 975 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 PGLYRP2Q96PD5 576 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 ZSCAN32Q9NX65 697 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 NCDNQ9UBB6 729 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 MRPS17Q9Y2R5 130 aaKnown RBP20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 PCDHGA2Q9Y5H1 932 aa20.08■□□□□ 0.81
SSSCA1-206ENST00000531405 M0QZQ0 153 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 PLA2G4BP0C869 781 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 YWHAHQ04917 246 aaPredicted RBP20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 TEAD2Q15562 447 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 ZBTB44Q8NCP5 570 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 ZSCAN18Q8TBC5 510 aaPredicted RBP20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 SMARCD2Q92925 531 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 CRISPLD1Q9H336 500 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 ZNF334Q9HCZ1 680 aaPredicted RBP20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 PRMT8Q9NR22 394 aaPredicted RBP20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 ASAH2Q9NR71 780 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 YIPF1Q9Y548 306 aa20.07■□□□□ 0.8
SSSCA1-206ENST00000531405 TTC26A0AVF1 554 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 CLTAP09496 248 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 PSMC3P17980 439 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 EPHA5P54756 1037 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 RILPL1Q5EBL4 403 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 ARSHQ5FYA8 562 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 MAP4K3Q8IVH8 894 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 SHKBP1Q8TBC3 707 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 NELL1Q92832 810 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 IRF7Q92985 503 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 CDK5RAP3Q96JB5 506 aa20.06■□□□□ 0.8
SSSCA1-206ENST00000531405 OBSL1O75147 1896 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 LACTBL1A8MY62 500 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 LILRB5O75023 590 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 OAZ2O95190 189 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 LRPAP1P30533 357 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 NCKAP1LP55160 1127 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 PPP2R3AQ06190 1150 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 PUM1Q14671 1186 aaKnown RBP eCLIP20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 ZBTB6Q15916 424 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 TMEM119Q4V9L6 283 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 ERICH6BQ5W0A0 696 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 HAUS6Q7Z4H7 955 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 BEST2Q8NFU1 509 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 LRRC15Q8TF66 581 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 SLITRK6Q9H5Y7 841 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 PLEKHA5Q9HAU0 1116 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 KCNG1Q9UIX4 513 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 MAFFQ9ULX9 164 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 SMG5Q9UPR3 1016 aaKnown RBP20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 PIAS3Q9Y6X2 628 aa20.05■□□□□ 0.8
SSSCA1-206ENST00000531405 ATG2BQ96BY7 2078 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 MAN2B1O00754 1011 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 PPEF2O14830 753 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 DUSP4Q13115 394 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 ENOX2Q16206 610 aaKnown RBP20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 RSPO4Q2I0M5 234 aaPredicted RBP20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 DSTYKQ6XUX3 929 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 GPIHBP1Q8IV16 184 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 FAM3CQ92520 227 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 RSPRY1Q96DX4 576 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 REEP2Q9BRK0 252 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 LRRC3Q9BY71 257 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 DNAJC25Q9H1X3 360 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 EPC1Q9H2F5 836 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 CHRDQ9H2X0 955 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 DLL3Q9NYJ7 618 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 KCND2Q9NZV8 630 aa20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 LARSQ9P2J5 1176 aaKnown RBP20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 UBQLN1Q9UMX0 589 aaKnown RBP20.04■□□□□ 0.8
SSSCA1-206ENST00000531405 A0A1W2PRU2 124 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 HEPACAM2A8MVW5 462 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 ZNF263O14978 683 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 HNRNPDLO14979 420 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 FAM189A1O60320 539 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 AARSP49588 968 aaKnown RBP eCLIP20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 LIG4P49917 911 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 DHX8Q14562 1220 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 C8orf34Q49A92 452 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 STXBP5Q5T5C0 1151 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 USP37Q86T82 979 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 TMC8Q8IU68 726 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 MFSD6LQ8IWD5 586 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 TTC9BQ8N6N2 239 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 LEMD2Q8NC56 503 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 DEPDC1BQ8WUY9 529 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 TMEM209Q96SK2 561 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 LMAN1LQ9HAT1 526 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 TRPV4Q9HBA0 871 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 SLC27A5Q9Y2P5 690 aa20.03■□□□□ 0.8
SSSCA1-206ENST00000531405 K7ENM7 598 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 ARNTLO00327 626 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 SOAT2O75908 522 aa20.02■□□□□ 0.8
SSSCA1-206ENST00000531405 TDGF1P13385 188 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms