RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TEAD2Q15562 447 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 VITQ6UXI7 678 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 SUMF1Q8NBK3 374 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 DEPDC1BQ8WUY9 529 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 PLEKHA5Q9HAU0 1116 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 EP300Q09472 2414 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 DOCK6Q96HP0 2047 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 NRG2O14511 850 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 ZNF263O14978 683 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 TBCAO75347 108 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 MICAL2O94851 1124 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 NCKAP1LP55160 1127 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 MTAPQ13126 283 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 PPP2R5DQ14738 602 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 RABEP1Q15276 862 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 TMEM119Q4V9L6 283 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 HYIQ5T013 277 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 POTEHQ6S545 545 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 HAUS6Q7Z4H7 955 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 FAM3CQ92520 227 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 CLDN23Q96B33 292 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 ZSWIM3Q96MP5 696 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 KIF2CQ99661 725 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 NTPCRQ9BSD7 190 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 RPF1Q9H9Y2 349 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 PRMT8Q9NR22 394 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 MAFFQ9ULX9 164 aa17.2■□□□□ 0.34
CHMP4A-204ENST00000530996 A0A1W2PRU2 124 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 OR6C75A6NL08 312 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 M0QZQ0 153 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 GJB2P29033 226 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 LRPAP1P30533 357 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 ALDH1A3P47895 512 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 EPHB3P54753 998 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.349e-8■□□□□ 9.5
CHMP4A-204ENST00000530996 KYAT1Q16773 422 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 KCTD17Q8N5Z5 321 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 BEST2Q8NFU1 509 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 SHKBP1Q8TBC3 707 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 CSGALNACT1Q8TDX6 532 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 REEP2Q9BRK0 252 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 MSTO1Q9BUK6 570 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 HAPLN2Q9GZV7 340 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 ZNF334Q9HCZ1 680 aaPredicted RBP17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 GMEB2Q9UKD1 530 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 RAB23Q9ULC3 237 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 ODF2LQ9ULJ1 636 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 USP18Q9UMW8 372 aa17.19■□□□□ 0.34
CHMP4A-204ENST00000530996 TTC26A0AVF1 554 aa17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 LACTBL1A8MY62 500 aa17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 ODC1P11926 461 aa17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 KPNA1P52294 538 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 ENOX2Q16206 610 aaKnown RBP17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 ARL6IP4Q66PJ3 421 aaKnown RBP17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 ARMCX5Q6P1M9 558 aa17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 FAM200AQ8TCP9 573 aa17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 OXCT2Q9BYC2 517 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 CHRDQ9H2X0 955 aa17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 DCHS1Q96JQ0 3298 aa17.18■□□□□ 0.34
CHMP4A-204ENST00000530996 PATJQ8NI35 1801 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 MED19A0JLT2 244 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 HEPACAM2A8MVW5 462 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 DPYSL4O14531 572 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 OGTO15294 1046 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 OAZ2O95190 189 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 CYP3A5P20815 502 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 UBA7P41226 1012 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 DUSP4Q13115 394 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 RSPO4Q2I0M5 234 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 JADE1Q6IE81 842 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 ZBTB44Q8NCP5 570 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 BORCS6Q96GS4 357 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 SEPT5Q99719 369 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 IER2Q9BTL4 223 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 EPC1Q9H2F5 836 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 TBX20Q9UMR3 447 aa17.17■□□□□ 0.34
CHMP4A-204ENST00000530996 NOTCH4Q99466 2003 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 MTMR11A4FU01 709 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 SLC38A8A6NNN8 435 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 PPEF2O14830 753 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 MOSPD3O75425 235 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 SOAT2O75908 522 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 PLCG1P19174 1290 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 CCNE1P24864 410 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 AARSP49588 968 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 CCR3P51677 355 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 CDR1P51861 262 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 EPHA5P54756 1037 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 TMEM132DQ14C87 1099 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 LPAL2Q16609 132 aa17.16■□□□□ 0.34
CHMP4A-204ENST00000530996 ARHGAP15Q53QZ3 475 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms