RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MMP8P22894 467 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 HIRAP54198 1017 aaPredicted RBP18.29■□□□□ 0.52
BRCA2-204ENST00000530893 TAOK1Q7L7X3 1001 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 FEZF2Q8TBJ5 459 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 ZNF606Q8WXB4 792 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 ZNF518BQ9C0D4 1074 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 C2orf40Q9H1Z8 148 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 LRRC4CQ9HCJ2 640 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 LRRC37A2A6NM11 1700 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 RASGRF2O14827 1237 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 IVDP26440 423 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 LMNB2Q03252 620 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 SGSM1Q2NKQ1 1148 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 CCDC50Q8IVM0 306 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 ZBTB8OSQ8IWT0 167 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 CCDC89Q8N998 374 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 JPH2Q9BR39 696 aaPredicted RBP18.28■□□□□ 0.52
BRCA2-204ENST00000530893 CSADQ9Y600 493 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 TLDC2A0PJX2 215 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 OGTO15294 1046 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 RALAP11233 206 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 ATF2P15336 505 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 DRP2Q13474 957 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 SNX1Q13596 522 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 DUOXA2Q1HG44 320 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 C6orf89Q6UWU4 347 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 MMS22LQ6ZRQ5 1243 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 CEP128Q6ZU80 1094 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 NCAPG2Q86XI2 1143 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 PASD1Q8IV76 773 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 XPO6Q96QU8 1125 aaKnown RBP18.28■□□□□ 0.52
BRCA2-204ENST00000530893 ACO2Q99798 780 aaKnown RBP18.28■□□□□ 0.52
BRCA2-204ENST00000530893 OSBPL8Q9BZF1 889 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 CDC42EP4Q9H3Q1 356 aaKnown RBP18.28■□□□□ 0.52
BRCA2-204ENST00000530893 PAPPA2Q9BXP8 1791 aa18.28■□□□□ 0.52
BRCA2-204ENST00000530893 SLC25A27O95847 323 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 ATP5DP30049 168 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 TAP1Q03518 808 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 MCL1Q07820 350 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 MAPK6Q16659 721 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 TTC31Q49AM3 519 aaPredicted RBP18.27■□□□□ 0.52
BRCA2-204ENST00000530893 LRRC38Q5VT99 294 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 PLPPR4Q7Z2D5 763 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 CCHCR1Q8TD31 782 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 RBM41Q96IZ5 413 aaKnown RBP18.27■□□□□ 0.52
BRCA2-204ENST00000530893 SCLT1Q96NL6 688 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 SERPINB12Q96P63 405 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 TCHPQ9BT92 498 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 NEU2Q9Y3R4 380 aa18.27■□□□□ 0.52
BRCA2-204ENST00000530893 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.51
BRCA2-204ENST00000530893 IGKV6-21A0A0C4DH24 114 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 LGR5O75473 907 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 CFHP08603 1231 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 C2CD6Q53TS8 623 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 CCDC25Q86WR0 208 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 RCOR2Q8IZ40 523 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 ATG4AQ8WYN0 398 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 CHMP6Q96FZ7 201 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 CCDC114Q96M63 670 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 FOXP3Q9BZS1 431 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 NIF3L1Q9GZT8 377 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 CCDC134Q9H6E4 229 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 AAASQ9NRG9 546 aa18.27■□□□□ 0.51
BRCA2-204ENST00000530893 POLR2AP24928 1970 aaKnown RBP18.26■□□□□ 0.51
BRCA2-204ENST00000530893 TMEM191CA6NGB0 347 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 TMEM191BP0C7N4 346 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 CHN1P15882 459 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 SLC26A2P50443 739 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 TAS2R40P59535 323 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 COPS2P61201 443 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 LAMTOR4Q0VGL1 99 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 AUHQ13825 339 aaKnown RBP18.26■□□□□ 0.51
BRCA2-204ENST00000530893 PRKG1Q13976 671 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 GKAP1Q5VSY0 366 aaPredicted RBP18.26■□□□□ 0.51
BRCA2-204ENST00000530893 LLGL2Q6P1M3 1020 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 ZNF365Q70YC5 407 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 PHLDB2Q86SQ0 1253 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 RELL1Q8IUW5 271 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 MICALL1Q8N3F8 863 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 TMEM35BQ8NCS4 154 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 HERPUD2Q9BSE4 406 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 ADAM7Q9H2U9 754 aa18.26■□□□□ 0.51
BRCA2-204ENST00000530893 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
BRCA2-204ENST00000530893 CPSF3Q9UKF6 684 aaKnown RBP18.26■□□□□ 0.51
BRCA2-204ENST00000530893 A0A0G2JLL6 359 aaPredicted RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 IRF6O14896 467 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 TCEA3O75764 348 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 FSBPO95073 299 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 TTC4O95801 387 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 CST3P01034 146 aaPredicted RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 PRKCBP05771 671 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 EIF4BP23588 611 aaKnown RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 CDH5P33151 784 aaPredicted RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 ADCY8P40145 1251 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 ITGA8P53708 1063 aa18.25■□□□□ 0.51
BRCA2-204ENST00000530893 IRX3P78415 501 aaPredicted RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 DRICH1Q6PGQ1 229 aaPredicted RBP18.25■□□□□ 0.51
BRCA2-204ENST00000530893 PRRT2Q7Z6L0 340 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms